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Fix issue with empty branches - #73
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Previously, indexing was failing for empty repositories with
getCommit("refs/heads/", "HEAD"): reference not found. This PR adds the allow_missing_branches option to thezoekt-git-indexcall. This will make it s.t., a ref is skipped if it cannot be found.Note for issue #59 : this might has the side-effect where if HEAD actually does reference something that exists, we will now silently fail (HEAD will not be indexed). We should follow up by raising a warning message when HEAD doesn't reference anything.