Repositories list

• discourse

  Public
  A platform for community discussion. Free, open, simple.

  Ruby

  •

  GNU General Public License v2.0

  •8.9k8.9k forks•00 stars•00 issues•00 pull requests•Updated Apr 23, 2026Apr 23, 2026

• bioconda-recipes

  Public
  Conda recipes for the bioconda channel.

  Shell

  •

  MIT License

  •3.9k3.9k forks•11 star•00 issues•00 pull requests•Updated Dec 11, 2025Dec 11, 2025

• discourse-brand-header

  Public
  Brand header theme component for Discourse

  JavaScript

  •

  MIT License

  •4545 forks•00 stars•00 issues•00 pull requests•Updated Sep 18, 2025Sep 18, 2025

• discourse-openid-connect

  Public
  Allows an OpenID Connect provider to be used as an authentication provider for Discourse

  Ruby

  •

  MIT License

  •5858 forks•00 stars•00 issues•00 pull requests•Updated Sep 11, 2025Sep 11, 2025

• homebrew-cask

  Public
  🍻 A CLI workflow for the administration of macOS applications distributed as binaries

  Ruby

  •

  BSD 2-Clause "Simplified" License

  •11k11k forks•00 stars•00 issues•00 pull requests•Updated Sep 4, 2025Sep 4, 2025

• discourse-crowd

  Public
  A plugin to enable authentication support for Atlassian Crowd

  Ruby

  •

  MIT License

  •44 forks•00 stars•00 issues•00 pull requests•Updated Sep 3, 2025Sep 3, 2025

• omniauth_crowd

  Public
  An OmniAuth provider for Atlassian Crowd REST API

  Ruby

  •

  MIT License

  •2020 forks•00 stars•00 issues•00 pull requests•Updated Sep 3, 2025Sep 3, 2025

• discourse-saml

  Public
  Support for SAML in Discourse

  Ruby

  •

  MIT License

  •4949 forks•00 stars•00 issues•00 pull requests•Updated Jul 25, 2025Jul 25, 2025

• jalview-js

  Public
  JavaScript artefacts and deployment documents for JalviewJS

  JavaScript

  •

  GNU Affero General Public License v3.0

  •44 forks•1616 stars•66 issues•11 pull request•Updated Jan 24, 2025Jan 24, 2025

• java2script

  Public
  Java2Script provides an Eclipse Java to JavaScript transpiler, with a nearly complete implementation of the Java Virtual Machine with AWT and Swing in JavaScri…

  Java

  •

  Other

  •3030 forks•00 stars•00 issues•00 pull requests•Updated Nov 17, 2023Nov 17, 2023

• hosting

  Public
  Example docker-compose setups for hosting Plausible Analytics

  387387 forks•00 stars•00 issues•00 pull requests•Updated Jun 14, 2023Jun 14, 2023

• modules

  Public
  Repository to host tool-specific module files for the Nextflow DSL2 community!

  Nextflow

  •

  MIT License

  •1k1k forks•00 stars•00 issues•00 pull requests•Updated Dec 15, 2022Dec 15, 2022

• igv

  Public
  Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

  Java

  •

  MIT License

  •407407 forks•00 stars•00 issues•00 pull requests•Updated Aug 30, 2022Aug 30, 2022

• hugo-os-detect

  Public
  JS, CSS and hugo partials to display/hide HTML elements depending on whether a specific OS is detected, or all OSes are to be displayed.

  JavaScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 4, 2022Apr 4, 2022

• hmmer

  Public
  HMMER: biological sequence analysis using profile HMMs

  C

  •

  Other

  •8989 forks•00 stars•00 issues•00 pull requests•Updated Mar 22, 2022Mar 22, 2022

• repo-tools

  Public
  random oneliners and scripts that jalview developers might find useful

  Shell

  •

  Creative Commons Zero v1.0 Universal

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 15, 2021Sep 15, 2021

• scripts

  Public
  An eclectic collection of helper scripts created for Jalview. Might be of use to others.

  PowerShell

  •11 fork•11 star•00 issues•00 pull requests•Updated Aug 12, 2021Aug 12, 2021

• docker_manager

  Public
  plugin for use with discourse docker image

  JavaScript

  •

  MIT License

  •7474 forks•00 stars•00 issues•00 pull requests•Updated Jul 20, 2021Jul 20, 2021

• discourse-versatile-banner

  Public
  HTML

  •

  MIT License

  •4949 forks•00 stars•00 issues•00 pull requests•Updated Jul 17, 2021Jul 17, 2021

• jalview-debian-downstream

  Public
  Java

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 21, 2021Feb 21, 2021

• jalview

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Mar 4, 2020Mar 4, 2020

• js

  Public
  umbrella for jalview in the browser - gitter enabled

  GNU Affero General Public License v3.0

  •11 fork•11 star•00 issues•22 pull requests•Updated Apr 16, 2019Apr 16, 2019

• biojson

  Public
  11 fork•22 stars•00 issues•00 pull requests•Updated Oct 7, 2015Oct 7, 2015

• exporter-templates

  Public
  Templates for exporting visualisations and supporting data from the Jalview Desktop

  CSS

  •00 forks•11 star•11 issue•00 pull requests•Updated Sep 24, 2015Sep 24, 2015