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Commits on Sep 28, 2018

• [maven-release-plugin] prepare for next development iteration

  josemduarte

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• [maven-release-plugin] prepare release biojava-5.1.1

  josemduarte

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Commits on Sep 26, 2018

• Merge pull request #802 from josemduarte/opIdsForSymmetry

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  josemduarte

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• Merge pull request #806 from josemduarte/asaCalcPerformance

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  josemduarte

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Commits on Sep 24, 2018

• Docs

  josemduarte

  committed
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Commits on Sep 7, 2018

• Explicit jaxb dependencies so that biojava can compile/run in all jdks up to 11

  josemduarte

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• Make BioJava compile under java9

  

  sbliven

  authored and

  josemduarte

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• Cleanup

  josemduarte

  committed
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Commits on Sep 6, 2018

• Using raw arrays for neighbor indices

  josemduarte

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Commits on Sep 5, 2018

• Change download chemcomp log to WARN

  lafita

  committed
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Commits on Sep 3, 2018

• Using asym ids for Subunit names

  josemduarte

  committed
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• More explicit operator ids for assembly cases with cartesian product. Added test

  josemduarte

  committed
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Commits on Aug 29, 2018

• [maven-release-plugin] prepare for next development iteration

  josemduarte

  committed
  9db10aa

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• [maven-release-plugin] prepare release biojava-5.1.0

  josemduarte

  committed
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• Not altering the exceptions in signature, keeping what we had with better logging

  josemduarte

  committed
  de9652b

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• Fixing #784

  josemduarte

  committed
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Commits on Aug 28, 2018

• Fixed part of a test and tagged it as Ignore

  josemduarte

  committed
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• Fixing issue #797 and better docs and naming

  josemduarte

  committed
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Commits on Aug 24, 2018

• Merge pull request #794 from biocryst/stoichiometry

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  josemduarte

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• Merge pull request #793 from biocryst/smallfixes

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  josemduarte

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Commits on Aug 21, 2018

• transformation ordering fix: total order required for the comparator

  

  Dmytro Guzenko

  committed
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• fix for cloning with null seqres groups

  

  Dmytro Guzenko

  committed
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Commits on Aug 16, 2018

• Logger string formatting changed to brackets (faster execution).

  

  Dmytro Guzenko

  committed
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Commits on Jul 29, 2018

• Code Refactoring to minimize dublicate code

  MikkelVestergaard

  committed
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• Merge branch 'issue712'

  MikkelVestergaard

  committed
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Commits on Jul 28, 2018

• Implemented bond-cloning in group-elements

  MikkelVestergaard

  committed
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Commits on Jul 13, 2018

• Merge branch 'master' into more-altloc-problems

  josemduarte

  committed
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• Implementing @sbliven suggestions

  josemduarte

  committed
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• Switch ftp.ebi.ac.uk URLs to use HTTP.

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  sbliven

  authored and

  josemduarte

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Commits on Jun 25, 2018

• Docs

  josemduarte

  committed
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Commits on Jun 24, 2018

• Fixing issue with duplicate altlocs in writing to mmcif. Improved docs.

  josemduarte

  committed
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• Some fixes in altloc test and 2 additions

  josemduarte

  committed
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Commits on Jun 15, 2018

• Fix test failure due to PDB change

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  sbliven

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Commits on May 22, 2018

• Next dev cycle for master

  josemduarte

  committed
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Commits on May 21, 2018

• Fix for #770, use LinkedHashMaps to keep order of biological assembly

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  pwrose

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