/* Demo code to run the above methods */

jjgao · andreasprlic · commit 93e3e7eb5ac6 · 2016-04-09T10:59:33.000-07:00
diff --git a/_wikis/BioJava:CookBook3:ModFinder.md b/_wikis/BioJava:CookBook3:ModFinder.md
@@ -60,7 +60,7 @@ public static void main(String[] args) {
 `       // identify all modificaitons from PDB:1CAD and print them`  
 `       String pdbId = "1CAD";`  
 `       Structure struc = reader.getStructureById(pdbId);`  
-`       Set`<ModifiedCompound>` mcs = identifyAllModfications(struc)`  
+`       Set`<ModifiedCompound>` mcs = identifyAllModfications(struc);`  
 `       for (ModifiedCompound mc : mcs) {`  
 `           System.out.println(mc.toString());`  
 `       }`
diff --git a/_wikis/BioJava:CookBook3:ModFinder.mediawiki b/_wikis/BioJava:CookBook3:ModFinder.mediawiki
@@ -44,7 +44,7 @@ public static void main(String[] args) {
 		// identify all modificaitons from PDB:1CAD and print them
 		String pdbId = "1CAD";
 		Structure struc = reader.getStructureById(pdbId);
-		Set<ModifiedCompound> mcs = identifyAllModfications(struc)
+		Set<ModifiedCompound> mcs = identifyAllModfications(struc);
 		for (ModifiedCompound mc : mcs) {
 			System.out.println(mc.toString());
 		}

Original file line number	Diff line number	Diff line change
`@@ -44,7 +44,7 @@ public static void main(String[] args) {`
`44`	`44`	`// identify all modificaitons from PDB:1CAD and print them`
`45`	`45`	`String pdbId = "1CAD";`
`46`	`46`	`Structure struc = reader.getStructureById(pdbId);`
`47`		`- Set<ModifiedCompound> mcs = identifyAllModfications(struc)`
	`47`	`+ Set<ModifiedCompound> mcs = identifyAllModfications(struc);`
`48`	`48`	`for (ModifiedCompound mc : mcs) {`
`49`	`49`	`System.out.println(mc.toString());`
`50`	`50`	`}`