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/* How do I get a sequence from NCBI? */
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_wikis/BioJava:CookBook:ExternalSources:NCBIFetch.md

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Besides building your very own database-driven sequence repository, most
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users will need to fetch sequences from public datasources. A primary
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source of sequence information is NCBI[1](http://www.ncbi.nlm.nih.gov).
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source of sequence information is [NCBI](http://www.ncbi.nlm.nih.gov).
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From its very beginning, Biojava was able to get sequences from NCBI
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with wrapper objects and methods. Most recently, the implementation of
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the Biojavax extension brought forth some changes (for example,

_wikis/BioJava:CookBook:ExternalSources:NCBIFetch.mediawiki

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== How do I get a sequence from NCBI? ==
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Besides building your very own database-driven sequence repository, most users will need to fetch sequences from public datasources. A primary source of sequence information is NCBI[http://www.ncbi.nlm.nih.gov]. From its very beginning, Biojava was able to get sequences from NCBI with wrapper objects and methods. Most recently, the implementation of the Biojavax extension brought forth some changes (for example, namespaces) and the corresponding objects and methods were modified accordingly.
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Besides building your very own database-driven sequence repository, most users will need to fetch sequences from public datasources. A primary source of sequence information is [http://www.ncbi.nlm.nih.gov NCBI]. From its very beginning, Biojava was able to get sequences from NCBI with wrapper objects and methods. Most recently, the implementation of the Biojavax extension brought forth some changes (for example, namespaces) and the corresponding objects and methods were modified accordingly.
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This example is a very simple starting point for any user who wants to get sequence info. However, beware that NCBI is looking over your shoulder and might limit your access if you are too greedy of their bandwith. Do not use these objects/methods to build a mirror copy of GenBank...
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