Using the new checks for polymer type in Group, ... - #555

Merged

sbliven merged 24 commits into

biojava:masterfrom

andreasprlic:master

Aug 23, 2016

Commits on Aug 11, 2016

Using the new checks for polymer type in Group, instead of similar checks in StructureTools.
andreasprlic
committed
3e59d75

Commits on Aug 15, 2016

Merge branch 'master' of github.com:biojava/biojava
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7d39984
working on #561
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9ebfb00

Commits on Aug 17, 2016

Merge branch 'master' of github.com:biojava/biojava
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f1d187e
adding check for lPeptideLinking to isPolymeric
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8307f59

Commits on Aug 18, 2016

moving utility classes to detect type of Chain to the Chain interface level (used to be StructureTools).
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96d8baa
Deprecating methods that got used to the Chain interface.
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814f188
making output less verbose
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7817e94
making output less verbose
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08ed01f
making output less verbose
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285583d
making output less verbose
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de35dd8
making output less verbose
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1960a4b
setting default log level to warn
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07f244a
making output less verbose
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8ba289d
making output less verbose
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0b2fe0a
trying to re-enable coverage tests now with less verbose unit test output.
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40b610c
making output less verbose
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56e81e6
disabling cobertura again, until we can successfully exclude MMCifFileTools
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106493d

Commits on Aug 19, 2016