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imagej_macros_and_scripts
imagej_macros_and_scripts PublicImageJ macros and scripts written at the imaging facility MRI
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napari-bigfish
napari-bigfish PublicA napari-plugin providing an alternative GUI for Big-FISH. Big-FISH is a python package for the analysis of smFISH images
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mri-workshop-machine-learning
mri-workshop-machine-learning PublicThe MRI machine learning workshop
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microglia-analyzer
microglia-analyzer PublicA Napari plugin meant to detect and segment microglia before extracting some measures about them.
Python 3
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OMERO-metrics is an omero web app to analyze and visualize microscope metrology data
MontpellierRessourcesImagerie/omero-metrics’s past year of commit activity - napari-microscopy-metrics Public
MontpellierRessourcesImagerie/napari-microscopy-metrics’s past year of commit activity - napari-unet Public
A Napari plugin allowing to make patches from images, train a UNet, run the inference on images and compute metrics. Specially made for filaments.
MontpellierRessourcesImagerie/napari-unet’s past year of commit activity - napari-sphot Public
A napari plugin to analyze the spatial heterogenity of transcription witin the cells of an embryo.
MontpellierRessourcesImagerie/napari-sphot’s past year of commit activity
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