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chore(deps): update rust crate noodles-vcf to 0.86.0 (#7041)
This PR contains the following updates: | Package | Type | Update | Change | |---|---|---|---| | [noodles-vcf](https://redirect.github.com/zaeleus/noodles) | workspace.dependencies | minor | `0.82.0` → `0.86.0` | --- ### Release Notes <details> <summary>zaeleus/noodles (noodles-vcf)</summary> ### [`v0.86.0`](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.85.0...noodles-vcf-0.86.0) [Compare Source](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.85.0...noodles-vcf-0.86.0) ### [`v0.85.0`](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.84.0...noodles-vcf-0.85.0) [Compare Source](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.84.0...noodles-vcf-0.85.0) ### [`v0.84.0`](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.83.0...noodles-vcf-0.84.0) [Compare Source](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.83.0...noodles-vcf-0.84.0) ### [`v0.83.0`](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.82.0...noodles-vcf-0.83.0) [Compare Source](https://redirect.github.com/zaeleus/noodles/compare/noodles-vcf-0.82.0...noodles-vcf-0.83.0) </details> --- ### Configuration 📅 **Schedule**: Branch creation - Between 12:00 AM and 03:59 AM, only on Monday ( * 0-3 * * 1 ) (UTC), Automerge - At any time (no schedule defined). 🚦 **Automerge**: Enabled. ♻ **Rebasing**: Whenever PR becomes conflicted, or you tick the rebase/retry checkbox. 🔕 **Ignore**: Close this PR and you won't be reminded about this update again. --- - [ ] <!-- rebase-check -->If you want to rebase/retry this PR, check this box --- This PR was generated by [Mend Renovate](https://mend.io/renovate/). View the [repository job log](https://developer.mend.io/github/vortex-data/vortex). <!--renovate-debug:eyJjcmVhdGVkSW5WZXIiOiI0My42Ni40IiwidXBkYXRlZEluVmVyIjoiNDMuNjYuNCIsInRhcmdldEJyYW5jaCI6ImRldmVsb3AiLCJsYWJlbHMiOlsiY2hhbmdlbG9nL2Nob3JlIl19--> --------- Signed-off-by: Robert Kruszewski <github@robertk.io> Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> Co-authored-by: Robert Kruszewski <github@robertk.io>
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Cargo.lock

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Cargo.toml

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@@ -173,7 +173,7 @@ mimalloc = "0.1.42"
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moka = { version = "0.12.10", default-features = false }
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multiversion = "0.8.0"
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noodles-bgzf = "0.46.0"
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noodles-vcf = "0.82.0"
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noodles-vcf = { version = "0.86.0", features = ["async"] }
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num-traits = "0.2.19"
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num_enum = { version = "0.7.3", default-features = false }
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object_store = { version = "0.12.4", default-features = false }

vortex-bench/src/statpopgen/download_vcf.rs

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@@ -61,7 +61,7 @@ impl StatPopGenBenchmark {
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let mut bgzf_reader = noodles_bgzf::r#async::io::Reader::new(buf_reader);
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// Read and parse VCF header
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let mut vcf_reader = noodles_vcf::AsyncReader::new(&mut bgzf_reader);
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let mut vcf_reader = noodles_vcf::r#async::io::Reader::new(&mut bgzf_reader);
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// Read and print the first 100,000 records
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let header = vcf_reader.read_header().await?;

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