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feedgnuplot
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executable file
·697 lines (587 loc) · 19.9 KB
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#!/usr/bin/perl
use strict;
use warnings;
use Getopt::Long;
use Time::HiRes qw( usleep );
use IO::Handle;
use List::Util qw( first );
use Scalar::Util qw( looks_like_number );
use Text::ParseWords;
use threads;
use threads::shared;
use Thread::Queue;
use Pod::Usage;
my %options;
interpretCommandline(\%options);
my $gnuplotVersion = getGnuplotVersion();
# list containing the plot data. Each element is a reference to a list, representing the data for
# one curve. The first 'point' is a hash describing various curve parameters. The rest are all
# references to lists of (x,y) tuples
my @curves = ();
# list mapping curve names to their indices in the @curves list
my %curveIndices = ();
# now start the data acquisition and plotting threads
my $dataQueue;
# latest domain variable present in our data
my $latestX;
my $streamingFinished : shared = undef;
if($options{stream})
{
if( $options{hardcopy})
{
$options{stream} = undef;
}
$dataQueue = Thread::Queue->new();
my $addThr = threads->create(\&mainThread);
# spawn the plot updating thread. If I'm replotting from a data trigger, I don't need this
my $plotThr = threads->create(\&plotUpdateThread) unless $options{stream} < 0;
while(<>)
{
chomp;
# place every line of input to the queue, so that the plotting thread can process it. if we are
# using an implicit domain (x = line number), then we send it on the data queue also, since
# $. is not meaningful in the plotting thread
if(!$options{domain})
{
$_ .= " $.";
}
$dataQueue->enqueue($_);
}
$streamingFinished = 1;
$plotThr->join() if defined $plotThr;
$addThr->join();
}
else
{ mainThread(); }
sub interpretCommandline
{
# if I'm using a self-plotting data file with a #! line, then $ARGV[0] will contain ALL of the
# options and $ARGV[1] will contain the data file to plot. In this case I need to split $ARGV[0] so
# that GetOptions() can parse it correctly. On the other hand, if I'm plotting normally (not with
# #!) a file with spaces in the filename, I don't want to split the filename. Hopefully this logic
# takes care of both those cases.
if (exists $ARGV[0] && !-r $ARGV[0])
{
unshift @ARGV, shellwords shift @ARGV;
}
my $options = shift;
# everything off by default:
# do not stream in the data by default
# point plotting by default.
# no monotonicity checks by default
# normal histograms by default
$options{ maxcurves } = 100;
$options{ histstyle} = 'freq';
# Previously I was using 'legend=s%' and 'curvestyle=s%' for curve addressing. This had cleaner
# syntax, but disregarded the order of the given options. This resulted in arbitrarily ordered
# curves. I thus make parse these into lists, and then also make hashes, for later use
# needed for these to be parsed into an array-ref
$options{legend} = [];
$options{curvestyle} = [];
$options{histogram} = [];
GetOptions($options, 'stream:s', 'domain!', 'dataid!', '3d!', 'colormap!', 'lines!', 'points!',
'circles', 'legend=s{2}', 'autolegend!', 'xlabel=s', 'ylabel=s', 'y2label=s', 'zlabel=s',
'title=s', 'xlen=f', 'ymin=f', 'ymax=f', 'xmin=f', 'xmax=f', 'y2min=f', 'y2max=f',
'zmin=f', 'zmax=f', 'y2=s@', 'curvestyle=s{2}', 'curvestyleall=s', 'extracmds=s@',
'square!', 'square_xy!', 'hardcopy=s', 'maxcurves=i', 'monotonic!',
'histogram=s@', 'binwidth=f', 'histstyle=s',
'terminal=s',
'extraValuesPerPoint=i', 'help', 'dump',
'geometry=s') or pod2usage(1);
# handle various cmdline-option errors
if ( $options->{help} )
{ pod2usage(0); }
# no global style if one isn't given
$options->{curvestyleall} = '' unless defined $options->{curvestyleall};
# expand options that are given as comma-separated lists
for my $listkey (qw(histogram y2))
{
@{$options{$listkey}} = map split('\s*,\s*', $_), @{$options{$listkey}}
if defined $options{$listkey};
}
# --legend and --curvestyle options are conceptually hashes, but are parsed as
# arrays in order to preserve the ordering. I parse both of these into hashes
# because those are useful to have later. After this I can access individual
# legends with $options{legend_hash}{curveid}
for my $listkey (qw(legend curvestyle))
{
$options{"${listkey}_hash"} = {};
my $n = scalar @{$options{$listkey}}/2;
foreach my $idx (0..$n-1)
{
$options{"${listkey}_hash"}{$options{$listkey}[$idx*2]} = $options{$listkey}[$idx*2 + 1];
}
}
# parse stream option. Allowed only numbers >= 0 or 'trigger'
if(defined $options->{stream})
{
if ( $options->{stream} eq '')
{
# if no streaming period is given, default to 1Hz.
$options->{stream} = 1;
}
if( !looks_like_number $options->{stream} )
{
if($options->{stream} eq 'trigger')
{
$options->{stream} = 0;
}
else
{
print STDERR "--stream can only take in values >=0 or 'trigger'\n";
exit 1;
}
}
if ( $options->{stream} == 0 )
{
$options->{stream} = -1;
}
elsif ( $options->{stream} <= 0)
{
print STDERR "--stream can only take in values >=0 or 'trigger'\n";
exit 1;
}
}
if ($options->{colormap})
{
# colormap styles all curves with palette. Seems like there should be a way to do this with a
# global setting, but I can't get that to work
$options->{curvestyleall} .= ' palette';
}
if ( $options->{'3d'} )
{
if ( !$options->{domain} )
{
print STDERR "--3d only makes sense with --domain\n";
exit -1;
}
if ( defined $options->{y2min} || defined $options->{y2max} || defined $options->{y2} )
{
print STDERR "--3d does not make sense with --y2...\n";
exit -1;
}
if ( defined $options->{xlen} )
{
print STDERR "--3d does not make sense with --xlen\n";
exit -1;
}
if ( defined $options->{monotonic} )
{
print STDERR "--3d does not make sense with --monotonic\n";
exit -1;
}
if ( defined $options->{binwidth} || @{$options->{histogram}} )
{
print STDERR "--3d does not make sense with histograms\n";
exit -1;
}
}
else
{
if(!$options->{colormap})
{
if ( defined $options->{zmin} || defined $options->{zmax} || defined $options->{zlabel} )
{
print STDERR "--zmin/zmax/zlabel only makes sense with --3d or --colormap\n";
exit -1;
}
}
if ( defined $options->{square_xy} )
{
print STDERR "--square_xy only makes sense with --3d\n";
exit -1;
}
}
if(defined $options{xlen} && !$options{stream} )
{
print STDERR "--xlen does not make sense without --stream\n";
exit -1;
}
# --xlen implies an order to the data, so I force monotonicity
$options{monotonic} = 1 if defined $options{xlen};
if( $options{histstyle} !~ /freq|cum|uniq|cnorm/ )
{
print STDERR "unknown histstyle. Allowed are 'freq...', 'cum...', 'uniq...', 'cnorm...'\n";
exit -1;
}
}
sub getGnuplotVersion
{
open(GNUPLOT_VERSION, 'gnuplot --version |') or die "Couldn't run gnuplot";
my ($gnuplotVersion) = <GNUPLOT_VERSION> =~ /gnuplot\s*(\d*\.\d*)/;
if (!$gnuplotVersion)
{
print STDERR "Couldn't find the version of gnuplot. Does it work? Trying anyway...\n";
$gnuplotVersion = 0;
}
close(GNUPLOT_VERSION);
return $gnuplotVersion;
}
sub plotUpdateThread
{
while(! $streamingFinished)
{
usleep( $options{stream} * 1e6 );
$dataQueue->enqueue('replot');
}
$dataQueue->enqueue(undef);
}
sub mainThread
{
my $valuesPerPoint = 1;
if($options{extraValuesPerPoint}) { $valuesPerPoint += $options{extraValuesPerPoint}; }
if($options{colormap}) { $valuesPerPoint++; }
if($options{circles} ) { $valuesPerPoint++; }
local *PIPE;
my $dopersist = '';
if($gnuplotVersion >= 4.3)
{
$dopersist = '--persist' if(!$options{stream});
}
if(exists $options{dump})
{
*PIPE = *STDOUT;
}
else
{
my $geometry = defined $options{geometry} ?
"-geometry $options{geometry}" : '';
open PIPE, "|gnuplot $geometry $dopersist" or die "Can't initialize gnuplot\n";
}
autoflush PIPE 1;
my $outputfile;
my $outputfileType;
if( $options{hardcopy})
{
$outputfile = $options{hardcopy};
$outputfile =~ /\.(eps|ps|pdf|png|svg)$/i;
$outputfileType = $1 ? lc $1 : '';
my %terminalOpts =
( eps => 'postscript solid color enhanced eps',
ps => 'postscript solid color landscape 10',
pdf => 'pdfcairo solid color font ",10" size 11in,8.5in',
png => 'png size 1280,1024',
svg => 'svg');
$options{terminal} ||= $terminalOpts{$outputfileType}
if $terminalOpts{$outputfileType};
die "Asked to plot to file '$outputfile', but I don't know which terminal to use, and no --terminal given"
unless $options{terminal};
}
print PIPE "set terminal $options{terminal}\n" if $options{terminal};
print PIPE "set output \"$outputfile\"\n" if $outputfile;
# If a bound isn't given I want to set it to the empty string, so I can communicate it simply to
# gnuplot
$options{xmin} = '' unless defined $options{xmin};
$options{xmax} = '' unless defined $options{xmax};
$options{ymin} = '' unless defined $options{ymin};
$options{ymax} = '' unless defined $options{ymax};
$options{y2min} = '' unless defined $options{y2min};
$options{y2max} = '' unless defined $options{y2max};
$options{zmin} = '' unless defined $options{zmin};
$options{zmax} = '' unless defined $options{zmax};
print PIPE "set xtics\n";
if($options{y2})
{
print PIPE "set ytics nomirror\n";
print PIPE "set y2tics\n";
# if any of the ranges are given, set the range
print PIPE "set y2range [$options{y2min}:$options{y2max}]\n" if length( $options{y2min} . $options{y2max} );
}
# set up plotting style
my $style = '';
if($options{lines}) { $style .= 'lines';}
if($options{points}) { $style .= 'points';}
if($options{circles})
{
$options{curvestyleall} = "with circles $options{curvestyleall}";
}
# if any of the ranges are given, set the range
print PIPE "set xrange [$options{xmin}:$options{xmax}]\n" if length( $options{xmin} . $options{xmax} );
print PIPE "set yrange [$options{ymin}:$options{ymax}]\n" if length( $options{ymin} . $options{ymax} );
print PIPE "set zrange [$options{zmin}:$options{zmax}]\n" if length( $options{zmin} . $options{zmax} );
print PIPE "set style data $style\n" if $style;
print PIPE "set grid\n";
print(PIPE "set xlabel \"$options{xlabel }\"\n") if defined $options{xlabel};
print(PIPE "set ylabel \"$options{ylabel }\"\n") if defined $options{ylabel};
print(PIPE "set zlabel \"$options{zlabel }\"\n") if defined $options{zlabel};
print(PIPE "set y2label \"$options{y2label}\"\n") if defined $options{y2label};
print(PIPE "set title \"$options{title }\"\n") if defined $options{title};
if($options{square})
{
# set a square aspect ratio. Gnuplot does this differently for 2D and 3D plots
if(! $options{'3d'})
{
print(PIPE "set size ratio -1\n");
}
else
{
print(PIPE "set view equal xyz\n");
}
}
if($options{square_xy})
{
print(PIPE "set view equal xy\n");
}
if($options{colormap})
{
print PIPE "set cbrange [$options{zmin}:$options{zmax}]\n" if length( $options{zmin} . $options{zmax} );
}
# For the specified values, set the legend entries to 'title "blah blah"'
if(@{$options{legend}})
{
# @{$options{legend}} is a list where consecutive pairs are (curveID,
# legend). I use $options{legend} here instead of $options{legend_hash}
# because I create a new curve when I see a new one, and the hash is
# unordered, thus messing up the ordering
my $n = scalar @{$options{legend}}/2;
foreach my $idx (0..$n-1)
{
setCurveLabel($options{legend}[$idx*2 ],
$options{legend}[$idx*2 + 1]);
}
}
# add the extra curve options
if(@{$options{curvestyle}})
{
# @{$options{curvestyle}} is a list where consecutive pairs are (curveID,
# style). I use $options{curvestyle} here instead of
# $options{curvestyle_hash} because I create a new curve when I see a new
# one, and the hash is unordered, thus messing up the ordering
my $n = scalar @{$options{curvestyle}}/2;
foreach my $idx (0..$n-1)
{
addCurveOption($options{curvestyle}[$idx*2 ],
$options{curvestyle}[$idx*2 + 1]);
}
}
# For the values requested to be printed on the y2 axis, set that
foreach (@{$options{y2}})
{
addCurveOption($_, 'axes x1y2 linewidth 3');
}
# add the extra global options
if($options{extracmds})
{
foreach (@{$options{extracmds}})
{
print(PIPE "$_\n");
}
}
# set up histograms
$options{binwidth} ||= 1; # if no binwidth given, set it to 1
print PIPE
"set boxwidth $options{binwidth}\n" .
"histbin(x) = $options{binwidth} * floor(0.5 + x/$options{binwidth})\n";
foreach (@{$options{histogram}})
{
setCurveAsHistogram( $_ );
}
# regexp for a possibly floating point, possibly scientific notation number
my $numRE = '-?\d*\.?\d+(?:[Ee][-+]?\d+)?';
# a point may be preceded by an id
my $pointRE = $options{dataid} ? '(\S+)\s+' : '()';
$pointRE .= '(' . join('\s+', ($numRE) x $valuesPerPoint) . ')';
$pointRE = qr/$pointRE/;
my @domain;
my $haveNewData;
# I should be using the // operator, but I'd like to be compatible with perl 5.8
while( $_ = (defined $dataQueue ? $dataQueue->dequeue() : <>))
{
next if /^#/o;
if( $options{stream} && /^clear/o )
{ clearCurves(); }
if(! /^replot/o)
{
# parse the incoming data lines. The format is
# x id0 dat0 id1 dat1 ....
# where idX is the ID of the curve that datX corresponds to
#
# $options{domain} indicates whether the initial 'x' is given or not (if not, the line
# number is used)
# $options{dataid} indicates whether idX is given or not (if not, the point order in the
# line is used)
# 3d plots require $options{domain}, and dictate "x y" for the domain instead of just "x"
if($options{domain})
{
/($numRE)/go or next;
$domain[0] = $1;
if($options{'3d'})
{
/($numRE)/go or next;
$domain[1] = $1;
}
elsif( $options{monotonic} )
{
if( defined $latestX && $domain[0] < $latestX )
{
# the x-coordinate of the new point is in the past, so I wipe out all the data for this curve
# and start anew
clearCurves();
}
else
{ $latestX = $domain[0]; }
}
}
else
{
# since $. is not meaningful in the plotting thread if we're using the data queue, we pass
# $. on the data queue in that case
if(defined $dataQueue)
{
s/ ([\d]+)$//o;
$domain[0] = $1;
}
else
{
$domain[0] = $.;
}
}
my $id = -1;
while (/$pointRE/go)
{
if($1 ne '') {$id = $1;}
else {$id++; }
$haveNewData = 1;
pushPoint(getCurve($id),
[@domain, split( /\s+/, $2)]);
}
}
elsif($options{stream})
{
# we get here if we need to replot AND if we're streaming
next unless $haveNewData;
$haveNewData = undef;
if( $options{xlen} )
{
pruneOldData($domain[0] - $options{xlen});
plotStoredData($domain[0] - $options{xlen}, $domain[0]);
}
else
{ plotStoredData(); }
}
}
# finished reading in all. Plot what we have
plotStoredData();
if ( $options{hardcopy})
{
print PIPE "set output\n";
# sleep until the plot file exists, and it is closed. Sometimes the output is
# still being written at this point
usleep(100_000) until -e $outputfile;
usleep(100_000) until(system("fuser -s \"$outputfile\""));
print "Wrote output to $outputfile\n";
return;
}
# we persist gnuplot, so we shouldn't need this sleep. However, once
# gnuplot exits, but the persistent window sticks around, you can no
# longer interactively zoom the plot. So we still sleep
sleep(100000) unless $options{dump};
}
sub pruneOldData
{
my ($oldestx) = @_;
foreach my $curve (@curves)
{
if( @$curve > 1 )
{
if( my $firstInWindow = first {$curve->[$_][0] >= $oldestx} 1..$#$curve )
{ splice( @$curve, 1, $firstInWindow-1 ); }
else
{ splice( @$curve, 1); }
}
}
}
sub plotStoredData
{
my ($xmin, $xmax) = @_;
print PIPE "set xrange [$xmin:$xmax]\n" if defined $xmin;
# get the options for those curves that have any data
my @nonemptyCurves = grep {@$_ > 1} @curves;
my @extraopts = map {$_->[0]{options}} @nonemptyCurves;
my $body = join(', ' , map({ "'-' $_" } @extraopts) );
if($options{'3d'}) { print PIPE "splot $body\n"; }
else { print PIPE "plot $body\n"; }
foreach my $buf (@nonemptyCurves)
{
# send each point to gnuplot. Ignore the first "point" since it's the
# curve options
for my $elem (@{$buf}[1..$#$buf])
{
print PIPE "@$elem\n";
}
print PIPE "e\n";
}
}
sub updateCurveOptions
{
# generates the 'options' string for a curve, based on its legend title and its other options
# These could be integrated into a single string, but that raises an issue in the no-title
# case. When no title is specified, gnuplot will still add a legend entry with an unhelpful '-'
# label. Thus I explicitly do 'notitle' for that case
my ($curveoptions, $id) = @_;
# use the given title, unless we're generating a legend automatically. Given titles
# override autolegend
my $title;
if(defined $curveoptions->{title})
{ $title = $curveoptions->{title}; }
elsif( $options{autolegend} )
{ $title = $id; }
my $titleoption = defined $title ? "title \"$title\"" : "notitle";
my $curvestyleall = '';
$curvestyleall = $options{curvestyleall}
if defined $options{curvestyleall} && !defined $options{curvestyle_hash}{$id};
my $histoptions = $curveoptions->{histoptions} || '';
$curveoptions->{options} = "$histoptions $titleoption $curveoptions->{extraoptions} $curvestyleall";
}
sub getCurve
{
# This function returns the curve corresponding to a particular label, creating a new curve if
# necessary
if(scalar @curves >= $options{maxcurves})
{
print STDERR "Tried to exceed the --maxcurves setting.\n";
print STDERR "Invoke with a higher --maxcurves limit if you really want to do this.\n";
exit;
}
my ($id) = @_;
if( !exists $curveIndices{$id} )
{
push @curves, [{extraoptions => ' '}]; # push a curve with no data and no options
$curveIndices{$id} = $#curves;
updateCurveOptions($curves[$#curves][0], $id);
}
return $curves[$curveIndices{$id}];
}
sub addCurveOption
{
my ($id, $str) = @_;
my $curve = getCurve($id);
$curve->[0]{extraoptions} .= "$str ";
updateCurveOptions($curve->[0], $id);
}
sub setCurveLabel
{
my ($id, $str) = @_;
my $curve = getCurve($id);
$curve->[0]{title} = $str;
updateCurveOptions($curve->[0], $id);
}
sub setCurveAsHistogram
{
my ($id, $str) = @_;
my $curve = getCurve($id);
$curve->[0]{histoptions} = 'using (histbin($2)):(1.0) smooth ' . $options{histstyle};
updateCurveOptions($curve->[0], $id);
}
# remove all the curve data
sub clearCurves
{
foreach my $curve(@curves)
{ splice( @$curve, 1 ); }
}
# function to add a point to the plot. Assumes that the curve indexed by $idx already exists
sub pushPoint
{
my ($curve, $xy) = @_;
push @$curve, $xy;
}