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base repository: snakemake/snakemake
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base: v9.16.0
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head repository: snakemake/snakemake
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compare: v9.16.2
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  • 4 commits
  • 5 files changed
  • 2 contributors

Commits on Jan 29, 2026

  1. fix: do not decompress source files during caching, keep them unchang… 

    …ed instead (#3944)

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### QC
<!-- Make sure that you can tick the boxes below. -->

* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).
    @johanneskoester
    johanneskoester authored Jan 29, 2026
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  2. chore(main): release 9.16.1 (#3945) 

    🤖 I have created a release *beep* *boop*
---


##
[9.16.1](v9.16.0...v9.16.1)
(2026-01-29)


### Bug Fixes

* do not decompress source files during caching, keep them unchanged
instead ([#3944](#3944))
([ca72878](ca72878))

---
This PR was generated with [Release
Please](https://github.com/googleapis/release-please). See
[documentation](https://github.com/googleapis/release-please#release-please).
    @snakemake-bot
    snakemake-bot authored Jan 29, 2026
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  3. fix: handle str input in fmt_iofile (#3946) 

    <!--Add a description of your PR here-->

### QC
<!-- Make sure that you can tick the boxes below. -->

* [x] The PR contains a test case for the changes or the changes are
already covered by an existing test case.
* [x] The documentation (`docs/`) is updated to reflect the changes or
this is not necessary (e.g. if the change does neither modify the
language nor the behavior or functionalities of Snakemake).


<!-- This is an auto-generated comment: release notes by coderabbit.ai
-->

## Summary by CodeRabbit

* **Refactor**
* Enhanced type safety and input validation for internal file handling
functions through improved type annotations and runtime checks.

<sub>✏️ Tip: You can customize this high-level summary in your review
settings.</sub>

<!-- end of auto-generated comment: release notes by coderabbit.ai -->
    @johanneskoester
    johanneskoester authored Jan 29, 2026
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  4. chore(main): release 9.16.2 (#3947) 

    🤖 I have created a release *beep* *boop*
---


##
[9.16.2](v9.16.1...v9.16.2)
(2026-01-29)


### Bug Fixes

* handle str input in fmt_iofile
([#3946](#3946))
([5df0c0b](5df0c0b))

---
This PR was generated with [Release
Please](https://github.com/googleapis/release-please). See
[documentation](https://github.com/googleapis/release-please#release-please).
    @snakemake-bot
    snakemake-bot authored Jan 29, 2026
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