Skip to content

Commit 4ea470d

Browse files
committed
Add image to mesh script RTD page
1 parent 100c616 commit 4ea470d

1 file changed

Lines changed: 6 additions & 2 deletions

File tree

docs/ops/doc/examples/mesh_viz.rst

Lines changed: 6 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -2,9 +2,12 @@
22
3D Analysis and Visualization
33
=============================
44

5-
In this example, we will use SciJava Ops to construct a 3D mesh from a binary dataset, passing the result into `3D Viewer`_ for visualization. We use the `bat cochlea volume`_ dataset from the ImageJ sample images, which users can either download using the link or open from the ``File → Open Samples → Bat Cochlea Volume`` menu selection within Fiji.
5+
In this example, we will use SciJava Ops to construct a 3D mesh from a binary dataset, passing the result into `3D Viewer`_ for visualization. We use the `bat cochlea volume`_ dataset (more information `here <https://imagej.net/images/bat-cochlea-volume.txt>`_) from the ImageJ sample images, which users can either download using the link or open from the ``File → Open Samples → Bat Cochlea Volume`` menu selection within Fiji.
6+
7+
.. figure:: https://media.scijava.org/scijava-ops/1.0.1/mesh-visualization.png
8+
9+
**Left**: The original binary bat cochlea volume, displayed as an Image. **Right**: The convex hull generated by SciJava Ops, overlaid on the original binary bat cochlea volume.
610

7-
.. TODO: Add image
811

912
.. TODO: Update SciJava Ops Image -> imglib2-mesh
1013
@@ -85,4 +88,5 @@ The following script accepts the binary dataset as its sole input, and creates t
8588

8689
.. _3D Viewer: https://imagej.net/plugins/3d-viewer/
8790
.. _bat cochlea volume: https://imagej.net/images/bat-cochlea-volume.zip
91+
.. _bat cochlea info: https://imagej.net/images/bat-cochlea-volume.txt
8892
.. _marching cubes: https://en.wikipedia.org/wiki/Marching_cubes

0 commit comments

Comments
 (0)