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Welcome to the Ops documentation!

SciJava Ops is a framework for extensible algorithm retrieval and execution. SciJava Ops Image is a collection of Ops for scientific image processing, built on SciJava Ops.

The combination of these libraries allows declarative image analysis workflows, allowing users to think more about the what than the how.

.. toctree::
   :maxdepth: 2
   :caption: 🚀 Getting Started

   Purpose
   Concepts
   Installation
   ScriptingInFiji

.. toctree::
   :maxdepth: 2
   :caption: 🪄 How-to guides

   SearchingForOps
   CallingOps
   IntrospectingOps

.. toctree::
   :maxdepth: 2
   :caption: ⚙️ Examples

   examples/deconvolution
   examples/flim_analysis
   examples/gaussian_subtraction
   examples/mesh_viz
   examples/opencv_denoise
   examples/saca
   examples/scyjava
   examples/volume_labeling

.. toctree::
   :maxdepth: 2
   :caption: 🛠️ Development

   WritingYourOwnOpPackage
   ParameterConversion
   Migrating Ops Written for ImageJ Ops<MigratingFromImageJOps>
   Benchmarks

.. toctree::
   :maxdepth: 2
   :caption: 📚 Papers

   paper-2024/index

Indices and tables