From 7dec1bfbbd64569f0895107ca6395508aa23b0a6 Mon Sep 17 00:00:00 2001
From: John Bogovic <bogovicj@janelia.hhmi.org>
Date: Thu, 1 Feb 2024 14:09:58 -0500
Subject: [PATCH 1/2] bump n5, bigdataviewer, bigwarp versions

* add n5-zstandard
---
 pom.xml | 22 +++++++++++++---------
 1 file changed, 13 insertions(+), 9 deletions(-)

diff --git a/pom.xml b/pom.xml
index d97bae5..a8d32b7 100644
--- a/pom.xml
+++ b/pom.xml
@@ -991,7 +991,7 @@
 		<jitk.jitk-tps.version>${jitk-tps.version}</jitk.jitk-tps.version>
 
 		<!-- BigWarp - https://github.com/saalfeldlab/bigwarp -->
-		<bigwarp.version>8.0.0</bigwarp.version>
+		<bigwarp.version>9.1.0</bigwarp.version>
 		<bigwarp_fiji.version>${bigwarp.version}</bigwarp_fiji.version>
 		<sc.fiji.bigwarp_fiji.version>${bigwarp_fiji.version}</sc.fiji.bigwarp_fiji.version>
 
@@ -1012,7 +1012,7 @@
 		<!-- BigDataViewer - https://github.com/bigdataviewer -->
 
 		<!-- BigDataViewer Core - https://github.com/bigdataviewer/bigdataviewer-core -->
-		<bigdataviewer-core.version>10.4.10</bigdataviewer-core.version>
+		<bigdataviewer-core.version>10.4.13</bigdataviewer-core.version>
 		<sc.fiji.bigdataviewer-core.version>${bigdataviewer-core.version}</sc.fiji.bigdataviewer-core.version>
 
 		<!-- BigDataServer - https://github.com/bigdataviewer/bigdataviewer-server -->
@@ -1020,7 +1020,7 @@
 		<sc.fiji.bigdataviewer-server.version>${bigdataviewer-server.version}</sc.fiji.bigdataviewer-server.version>
 
 		<!-- BigDataViewer Visualization Tools - https://github.com/bigdataviewer/bigdataviewer-vistools -->
-		<bigdataviewer-vistools.version>1.0.0-beta-32</bigdataviewer-vistools.version>
+		<bigdataviewer-vistools.version>1.0.0-beta-34</bigdataviewer-vistools.version>
 		<sc.fiji.bigdataviewer-vistools.version>${bigdataviewer-vistools.version}</sc.fiji.bigdataviewer-vistools.version>
 
 		<!-- BigDataViewer Fiji - https://github.com/bigdataviewer/bigdataviewer_fiji -->
@@ -1109,7 +1109,7 @@
 		<net.imglib2.imglib2-label-multisets.version>${imglib2-label-multisets.version}</net.imglib2.imglib2-label-multisets.version>
 
 		<!-- N5 - https://github.com/saalfeldlab/n5 -->
-		<n5.version>3.0.2</n5.version>
+		<n5.version>3.1.1</n5.version>
 		<org.janelia.saalfeldlab.n5.version>${n5.version}</org.janelia.saalfeldlab.n5.version>
 
 		<!-- N5 AWS S3 - https://github.com/saalfeldlab/n5-aws-s3 -->
@@ -1125,11 +1125,11 @@
 		<org.janelia.saalfeldlab.n5-google-cloud.version>${n5-google-cloud.version}</org.janelia.saalfeldlab.n5-google-cloud.version>
 
 		<!-- N5 HDF5 Bindings - https://github.com/saalfeldlab/n5-hdf5 -->
-		<n5-hdf5.version>2.0.1</n5-hdf5.version>
+		<n5-hdf5.version>2.1.0</n5-hdf5.version>
 		<org.janelia.saalfeldlab.n5-hdf5.version>${n5-hdf5.version}</org.janelia.saalfeldlab.n5-hdf5.version>
 
 		<!-- N5 ImageJ Bindings - https://github.com/saalfeldlab/n5-ij -->
-		<n5-ij.version>3.2.6</n5-ij.version>
+		<n5-ij.version>4.0.2</n5-ij.version>
 		<org.janelia.saalfeldlab.n5-ij.version>${n5-ij.version}</org.janelia.saalfeldlab.n5-ij.version>
 
 		<!-- N5 ImgLib2 Bindings - https://github.com/saalfeldlab/n5-imglib2 -->
@@ -1137,17 +1137,21 @@
 		<org.janelia.saalfeldlab.n5-imglib2.version>${n5-imglib2.version}</org.janelia.saalfeldlab.n5-imglib2.version>
 
 		<!-- N5 Universe - https://github.com/saalfeldlab/n5-universe -->
-		<n5-universe.version>1.1.0</n5-universe.version>
+		<n5-universe.version>1.3.1</n5-universe.version>
 		<org.janelia.saalfeldlab.n5-universe.version>${n5-universe.version}</org.janelia.saalfeldlab.n5-universe.version>
 
 		<!-- N5 Viewer for Fiji - https://github.com/saalfeldlab/n5-viewer_fiji -->
-		<n5-viewer_fiji.version>5.3.1</n5-viewer_fiji.version>
+		<n5-viewer_fiji.version>6.0.1</n5-viewer_fiji.version>
 		<org.janelia.saalfeldlab.n5-viewer_fiji.version>${n5-viewer_fiji.version}</org.janelia.saalfeldlab.n5-viewer_fiji.version>
 
 		<!-- N5 Zarr - https://github.com/saalfeldlab/n5-zarr -->
-		<n5-zarr.version>1.0.1</n5-zarr.version>
+		<n5-zarr.version>1.2.0</n5-zarr.version>
 		<org.janelia.saalfeldlab.n5-zarr.version>${n5-zarr.version}</org.janelia.saalfeldlab.n5-zarr.version>
 
+		<!-- N5 ZStandard - https://github.com/JaneliaSciComp/n5-zstandard -->
+		<n5-zstandard.version>1.0.2</n5-zstandard.version>
+		<org.janelia.n5-zstandard.version>${n5-zstandard.version}</org.janelia.n5-zstandard.version>
+
 		<!-- Fiji-adjacent projects (available from ImageJ update sites) -->
 
 		<!-- MorphoLibJ - https://imagej.net/plugins/morpholibj -->

From 7e0b04b30b688825f3190bba74b26fd0d4d08471 Mon Sep 17 00:00:00 2001
From: John Bogovic <bogovicj@janelia.hhmi.org>
Date: Thu, 8 Feb 2024 13:18:45 -0500
Subject: [PATCH 2/2] n5-3.1.2

* fixes build issue for n5-blosc
---
 pom.xml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pom.xml b/pom.xml
index a8d32b7..8cddb9d 100644
--- a/pom.xml
+++ b/pom.xml
@@ -1109,7 +1109,7 @@
 		<net.imglib2.imglib2-label-multisets.version>${imglib2-label-multisets.version}</net.imglib2.imglib2-label-multisets.version>
 
 		<!-- N5 - https://github.com/saalfeldlab/n5 -->
-		<n5.version>3.1.1</n5.version>
+		<n5.version>3.1.2</n5.version>
 		<org.janelia.saalfeldlab.n5.version>${n5.version}</org.janelia.saalfeldlab.n5.version>
 
 		<!-- N5 AWS S3 - https://github.com/saalfeldlab/n5-aws-s3 -->