mega-melt: install needed native packages

ctrueden · ctrueden · commit b29019c90aa8 · 2022-09-26T14:42:08.000-05:00
Some components require certain native libraries to be present in order
to function. We would prefer to test these components, so let's install
the libraries they crave. This also means we can test n5-blosc now.
diff --git a/.github/setup.sh b/.github/setup.sh
@@ -2,5 +2,9 @@
 curl -fsLO https://raw.githubusercontent.com/scijava/scijava-scripts/master/ci-setup-github-actions.sh
 sh ci-setup-github-actions.sh
 
-# xmllint needed for melting pot
-sudo apt-get install libxml2-utils
+# Install needed packages.
+pkgs="libxml2-utils"       # needed for melting pot
+pkgs="$pkgs libxcb-shape0" # org.janelia:H5J_Loader_Plugin (fiji/H5J_Loader_Plugin@d026a1bb)
+pkgs="$pkgs libgtk2.0-0"   # net.imagej:imagej-opencv (imagej/imagej-opencv@21113e08)
+pkgs="$pkgs libblosc1"     # org.janelia.saalfeldlab:n5-blosc
+sudo apt-get -y install $(echo "$pkgs")
diff --git a/tests/run.sh b/tests/run.sh
@@ -172,10 +172,6 @@ chmod +x "$meltScript" ||
 # Request ID: null; S3 Extended Request ID: null; Proxy: null)
 echo "org.janelia.saalfeldlab/n5-aws-s3" > "$skipTestsFile" &&
 
-# java.lang.UnsatisfiedLinkError: Unable to load library 'blosc'
-echo "org.janelia.saalfeldlab/n5-blosc" >> "$skipTestsFile" &&
-echo "org.janelia.saalfeldlab/n5-zarr" >> "$skipTestsFile" &&
-
 # Error while checking the CLIJ2 installation: null
 echo "sc.fiji/labkit-pixel-classification" >> "$skipTestsFile" ||
   die "Failed to generate $skipTestsFile"
