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lines changed Original file line number Diff line number Diff line change 2929import org .biojava .nbio .structure .align .gui .MenuCreator ;
3030import org .biojava .nbio .structure .align .model .AFPChain ;
3131import org .biojava .nbio .structure .align .model .AfpChainWriter ;
32+ import org .biojava .nbio .structure .align .util .AlignmentTools ;
3233import org .biojava .nbio .structure .align .util .AtomCache ;
3334import org .biojava .nbio .structure .align .util .ResourceManager ;
3435import org .biojava .nbio .structure .align .util .UserConfiguration ;
@@ -286,7 +287,7 @@ protected void initCoords(){
286287 return ;
287288 }
288289 }
289- Structure artificial = DisplayAFP .getAlignedStructure (ca1 ,ca2 );
290+ Structure artificial = AlignmentTools .getAlignedStructure (ca1 ,ca2 );
290291 PDBHeader header = new PDBHeader ();
291292 String title = afpChain .getAlgorithmName () + " V." +afpChain .getVersion () + " : " + afpChain .getName1 () + " vs. " + afpChain .getName2 ();
292293 header .setTitle (title );
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