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How to run the python code using pyenv and vim with the plugin #1193
Description
I am using Python with pyenv . I have activated the env, but when I run the code in the script file with vim, an error occurs.
/biostack/tools/devtools/pyenv/versions/3.10.13/envs/scGPT/lib/python3.10/site-packages/scgpt/__init__.py|18 error| in <module> from . import model, tokenizer, scbank, utils, tasks
/biostack/tools/devtools/pyenv/versions/3.10.13/envs/scGPT/lib/python3.10/site-packages/scgpt/model/__init__.py|1 error| in <module> from .model import (
/biostack/tools/devtools/pyenv/versions/3.10.13/envs/scGPT/lib/python3.10/site-packages/scgpt/model/model.py|5 error| in <module> import torch
/biostack/tools/devtools/pyenv/versions/3.10.13/envs/scGPT/lib/python3.10/site-packages/torch/__init__.py|17 error| in <module> import ctypes
/biostack/tools/devtools/pyenv/versions/3.10.13/lib/python3.10/ctypes/__init__.py|8 error| in <module> from _ctypes import Union, Structure, Array ModuleNotFoundError: No module named '_ctypes'
But when I run the code in the Python interactive environment. No error reported.
Activity
diraol commentedon May 24, 2026
Hi @xiangpin , sorry for taking so long to give you an answer.
Can you please try the version from the branch of this PR ?
I hope it solves the problem.
Thanks!