From cc78f527521f6b7e37a990dd83e5654791ecf50b Mon Sep 17 00:00:00 2001 From: GitHub Action Date: Fri, 25 Sep 2026 07:04:45 +0000 Subject: [PATCH] Update Pathoplexus example data list --- index.html | 187 +++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 187 insertions(+) create mode 100644 index.html diff --git a/index.html b/index.html new file mode 100644 index 0000000..369cb6a --- /dev/null +++ b/index.html @@ -0,0 +1,187 @@ + + + + + + + Pathoplexus Example Files + + + + +
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Pathoplexus Example Data

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Example files for users to try out on the Pathoplexus demo instance. (Please do not upload these to the main website!)

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Currently example data is available for West Nile virus, Ebola Zaire, CCHF, and Andes virus. Metadata can be supplied in TSV or XLSX format - here we use XLSX for West Nile and TSV elsewhere, but all instances support both formats, and also a range of compression options.

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File NameSizeLast Modified
andes_virus_metadata.xlsx44.7 KB2026-09-25 07:04:39
andes_virus_test_sequences.fasta12.0 KB2026-09-25 07:04:39
cchfv_metadata.xlsx44.8 KB2026-09-25 07:04:39
cchfv_test_sequences.fasta18.6 KB2026-09-25 07:04:39
dengue_metadata.xlsx46.3 KB2026-09-25 07:04:39
dengue_test_sequences.fasta73.3 KB2026-09-25 07:04:39
ebola_zaire_metadata.xlsx46.3 KB2026-09-25 07:04:39
ebola_zaire_sequences.fasta547.4 KB2026-09-25 07:04:39
hmpv.fasta14.1 KB2026-09-25 07:04:39
hmpv_metadata.xlsx44.7 KB2026-09-25 07:04:39
mpox_metadata.xlsx46.0 KB2026-09-25 07:04:39
mpox_test_sequences.fasta505.7 KB2026-09-25 07:04:39
rsv_a.fasta15.2 KB2026-09-25 07:04:39
rsv_a_metadata.xlsx44.7 KB2026-09-25 07:04:39
rsv_b.fasta15.1 KB2026-09-25 07:04:39
rsv_b_metadata.xlsx44.8 KB2026-09-25 07:04:39
west_nile_metadata.xlsx46.1 KB2026-09-25 07:04:39
west_nile_raw_reads/raw_reads_1.fq.gz254.9 KB2026-09-25 07:04:39
west_nile_sequences.fasta113.9 KB2026-09-25 07:04:39
yellow_fever_metadata.xlsx46.4 KB2026-09-25 07:04:39
yellow_fever_test_sequences.fasta106.4 KB2026-09-25 07:04:39
zika_virus_metadata.xlsx45.8 KB2026-09-25 07:04:39
zika_virus_test_sequences.fasta101.7 KB2026-09-25 07:04:39
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