name: "Tests"

on:

pull_request:

types: ['opened', 'synchronize', 'reopened', 'ready_for_review']

branches:

- master

- stable

push:

branches:

- master

tags:

- "v*"

schedule:

- cron: "0 4 * * *"

defaults:

run:

shell: bash -l {0}

jobs:

tests:

runs-on: ubuntu-latest

name: "Tests"

strategy:

# NOTE: When changing the test matrix:

# * Update the after_n_builds in codecov.yml to match the number of

# builds in the matrix

# * You may need to create another example run for the notebook tests

# (see examples/ipynbtests.sh; examples/prep_example_data.py). This

# is because Python internals (usually bytecode, which is saved in

# CVs) can differ between minor Python versions.

matrix:

CONDA_PY:

- "3.13"

- "3.12"

- "3.11"

MINIMAL: [""]

include:

- CONDA_PY: "3.11"

MINIMAL: "minimal"

steps:

- uses: actions/checkout@v2

with:

fetch-depth: 2

- uses: actions/setup-python@v2

- uses: conda-incubator/setup-miniconda@v3

with:

auto-update-conda: true

python-version: ${{ matrix.CONDA_PY }}

miniforge-version: latest

- name: "Install requirements"

env:

MINIMAL: ${{ matrix.MINIMAL }}

CONDA_PY: ${{ matrix.CONDA_PY }}

run: |

if [ -z "$MINIMAL" ] ; then

source devtools/conda_install_reqs.sh

else

# In this case we're actually double-installing (not just

# installing requirements here). We prefer this to using the

# conda_install_reqs script so we can test deps coming from PyPI

python -m pip install -e .[test]

fi

python -m pip install autorelease

- name: "Install"

run: |

python -m pip install --no-deps -e .

- name: "Working directory"

run: |

pwd

ls -l

- name: "Check installation"

run: |

python -c "import openpathsampling; print(openpathsampling.version.full_version)"

- name: "Versions"

run: conda list

- name: "Autorelease check"

run: autorelease check --conf ./.autorelease/autorelease.yaml

#- name: "DEBUG: enable SSH login"

#uses: mxschmitt/action-tmate@v3

- name: "Unit Tests"

env:

PY_COLORS: "1"

run: py.test -vv -s --cov --cov-report xml

- name: "Tests: Experimental"

if: matrix.MINIMAL == '' && matrix.CONDA_PY != '2.7'

run: py.test openpathsampling/experimental/ -vv -s

- uses: codecov/codecov-action@v4

env:

CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

- name: "Notebook tests"

if: matrix.MINIMAL == ''

run: |

pushd examples/ && ./ipynbtests.sh || exit 1 && popd