From a12ae7942f537007ef07327e80322d71ef17a8aa Mon Sep 17 00:00:00 2001 From: Karl Broman Date: Mon, 25 Apr 2022 15:45:14 -0500 Subject: [PATCH 1/6] remove twitter from _config.yml --- _config.yml | 1 - 1 file changed, 1 deletion(-) diff --git a/_config.yml b/_config.yml index 489d9a3..1c3e6fc 100644 --- a/_config.yml +++ b/_config.yml @@ -13,7 +13,6 @@ author : name : Karl Broman email : kbroman@gmail.com github : kbroman - twitter : kwbroman feedburner : nil production_url : https://kbroman.github.io/github_tutorial From 3858ca5971864899c78e320b0e3fe4d410459120 Mon Sep 17 00:00:00 2001 From: Karl Broman Date: Fri, 10 Jun 2022 07:57:02 -0500 Subject: [PATCH 2/6] Add webrick to Gemfile --- Gemfile | 2 ++ 1 file changed, 2 insertions(+) diff --git a/Gemfile b/Gemfile index 6bb9eb9..924f4eb 100644 --- a/Gemfile +++ b/Gemfile @@ -1,2 +1,4 @@ gem 'github-pages' source 'https://rubygems.org' + +gem "webrick", "~> 1.7" From 7d2ed938ba90737dcaa48dbe116e9ba33d0e3a8d Mon Sep 17 00:00:00 2001 From: Karl Broman Date: Tue, 24 Mar 2026 08:51:00 -0500 Subject: [PATCH 3/6] fix broken link --- pages/resources.md | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/pages/resources.md b/pages/resources.md index 7d05379..9c2c810 100644 --- a/pages/resources.md +++ b/pages/resources.md @@ -11,7 +11,7 @@ for learning to use [git](https://git-scm.com) and Here are some examples. -- The [git documentation](https://git-scm.com/documentation) +- The [git documentation](https://git-scm.com/docs) - The [Pro Git book](https://git-scm.com/book) @@ -49,5 +49,3 @@ Here are some examples. - [Slides for lecture I gave about git/github, with notes](https://kbroman.org/Tools4RR/assets/lectures/04_git_withnotes.pdf) - [My brief summary of git commands](https://github.com/kbroman/Tools4RR/tree/master/04_Git/GitCommands/git_notes.md) - - From 1f81290139fef568e650057f2d2cd51d75631cf7 Mon Sep 17 00:00:00 2001 From: Karl Broman Date: Thu, 26 Mar 2026 07:49:53 -0500 Subject: [PATCH 4/6] replace broken link --- pages/resources.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pages/resources.md b/pages/resources.md index 9c2c810..85a357b 100644 --- a/pages/resources.md +++ b/pages/resources.md @@ -35,7 +35,7 @@ Here are some examples. - Using GitHub with [RStudio](https://www.rstudio.com): - [Using GitHub with R and Rstudio](https://markrchristie.wordpress.com/2013/11/26/using-github-with-r-and-rstudio/) - by [Mark Christie](https://markrchristie.wordpress.com/) + by [Mark Christie](https://www.christielab.com/) - [Getting started with GitHub](https://jennybc.github.io/2014-05-12-ubc/ubc-r/session2.4_github.html) from materials for a From 930d026ca6ea533f186fad2bcb4f35b8e2973952 Mon Sep 17 00:00:00 2001 From: Karl Broman Date: Fri, 27 Mar 2026 08:47:59 -0500 Subject: [PATCH 5/6] pages/resources: replace broken link --- pages/resources.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pages/resources.md b/pages/resources.md index 85a357b..1ca69a0 100644 --- a/pages/resources.md +++ b/pages/resources.md @@ -34,7 +34,7 @@ Here are some examples. - Using GitHub with [RStudio](https://www.rstudio.com): - - [Using GitHub with R and Rstudio](https://markrchristie.wordpress.com/2013/11/26/using-github-with-r-and-rstudio/) + - [Using GitHub with R and Rstudio](https://www.molecularecologist.com/2013/11/12/using-github-with-r-and-rstudio/) by [Mark Christie](https://www.christielab.com/) - [Getting started with GitHub](https://jennybc.github.io/2014-05-12-ubc/ubc-r/session2.4_github.html) From 075b4f4df359727e54a78a97bf5cbc12ebff901f Mon Sep 17 00:00:00 2001 From: Karl Broman Date: Sat, 28 Mar 2026 06:56:43 -0500 Subject: [PATCH 6/6] pages/resources: fix old link --- pages/resources.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pages/resources.md b/pages/resources.md index 1ca69a0..c600c2b 100644 --- a/pages/resources.md +++ b/pages/resources.md @@ -32,7 +32,7 @@ Here are some examples. - [Git and Github videos for beginners](https://www.dataschool.io/git-and-github-videos-for-beginners/) by [Kevin Markham](https://www.dataschool.io/about/) -- Using GitHub with [RStudio](https://www.rstudio.com): +- Using GitHub with [RStudio](https://posit.co/download/rstudio-desktop/): - [Using GitHub with R and Rstudio](https://www.molecularecologist.com/2013/11/12/using-github-with-r-and-rstudio/) by [Mark Christie](https://www.christielab.com/)