# GROMACS tutorials

This is the script of the [GROMACS tutorials](https://gromacstutorials.github.io/) webpage. 
All the GROMACS input files used or generated during the tutorials can be found
in the [gromacstutorials-inputs](https://github.com/gromacstutorials/gromacstutorials-inputs) repository.

The tutorials are compatible with the 2024.2 release of GROMACS.

<p float="left">
    <a href="https://gromacstutorials.github.io/sphinx/build/html/tutorials/level1/bulk-solution.html">
        <img src="https://raw.githubusercontent.com/gromacstutorials/gromacstutorials.github.io/2024.2/docs/avatars/level1/bulk-solution/bulk-solution-gromacs.png" width="32%" />
    </a>
    <a href="https://gromacstutorials.github.io/sphinx/build/html/tutorials/level1/protein-in-electrolyte.html">
        <img src="https://raw.githubusercontent.com/gromacstutorials/gromacstutorials.github.io/2024.2/docs/avatars/level1/protein-in-electrolyte/protein-in-electrolyte.png" width="32%" />
    </a>
    <a href="https://gromacstutorials.github.io/sphinx/build/html/tutorials/level2/stretching-a-polymer.html">
        <img src="https://raw.githubusercontent.com/gromacstutorials/gromacstutorials.github.io/2024.2/docs/avatars/level2/stretching-a-polymer/stretching-polymer-gromacs.png" width="32%" />
    </a>
</p>

The Matplotlib Pyplot functions for the figures are shared [here](https://github.com/simongravelle/pyplot-perso).

### Template ###

The template from the first page has been adapted from [HTML5 UP](https://html5up.net/).
The other pages use the [Sphinx](https://www.sphinx-doc.org/) generator with the [furo style](https://github.com/pradyunsg/furo).

### About me & Contact ###

I am a computer physicist in soft matter and fluids at interfaces. You can 
find more information on my [personal webpage](https://simongravelle.github.io/).

See the [contact page](https://gromacstutorials.github.io/doc-sphinx/build/html/contact/contact.html). 
You can report issues here on Github, or send me an [email](https://simongravelle.github.io/).
Your feedback is always appreciated.

### License and Acknowledgments ###

All the GROMACS inputs/data/parameter files and Python scripts are released under the 
GNU general public license v3.0. Feel free to adapt and/or re-publish them.  

This project has received funding from the European
Union's Horizon 2020 research and innovation programme
under the Marie Skłodowska-Curie grant agreement No 101065060.

![Acknowledgments-logos](https://raw.githubusercontent.com/simongravelle/credits/1c44b5ae76a33c5bbbd33a54243365c6abdc24b2/cnrs-uga-liphy-msca.png)
