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hard_sphere_wca.rs
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346 lines (313 loc) · 11.9 KB
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use crate::uvtheory::parameters::UVParameters;
use feos_core::{HelmholtzEnergyDual, StateHD};
use ndarray::prelude::*;
use num_dual::DualNum;
use std::f64::consts::PI;
use std::fmt;
use std::sync::Arc;
pub(super) const WCA_CONSTANTS_Q: [[f64; 4]; 3] = [
[1.92840364363978, 4.43165896265079E-01, 0.0, 0.0],
[
5.20120816141761E-01,
1.82526759234412E-01,
1.10319989659929E-02,
-7.97813995328348E-05,
],
[
0.0,
1.29885156087242E-02,
6.41039871789327E-03,
1.85866741090323E-05,
],
];
const WCA_CONSTANTS_ETA_A: [[f64; 4]; 4] = [
[-0.888512176, 0.265207151, -0.851803291, -1.380304110],
[-0.395548410, -0.626398537, -1.484059291, -3.041216688],
[-2.905719617, -1.778798984, -1.556827067, -4.308085347],
[0.429154871, 20.765871545, 9.341250676, -33.787719418],
];
const WCA_CONSTANTS_ETA_B: [[f64; 2]; 3] = [
[-0.883143456, -0.618156214],
[-0.589914255, -3.015264636],
[-2.152046477, 4.7038689542],
];
// New Fit to numerical integrals for uv-B3-theory
pub(super) const WCA_CONSTANTS_ETA_A_UVB3: [[f64; 4]; 4] = [
[2.64043218, -1.2184421, -22.90786387, 0.96433414],
[-16.75643936, 30.83929771, 73.08711814, -166.57701616],
[19.53170162, -88.87955657, -76.51387192, 443.68942745],
[-3.77740877, 83.04694547, 21.62502721, -304.8643176],
];
pub(super) const WCA_CONSTANTS_ETA_B_UVB3: [[f64; 2]; 3] = [
[2.19821588, -20.45005484],
[-13.47050687, 56.65701375],
[12.90119266, -42.71680606],
];
#[derive(Debug, Clone)]
pub struct HardSphereWCA {
pub parameters: Arc<UVParameters>,
}
impl<D: DualNum<f64> + Copy> HelmholtzEnergyDual<D> for HardSphereWCA {
/// Helmholtz energy for hard spheres, eq. 19 (check Volume)
fn helmholtz_energy(&self, state: &StateHD<D>) -> D {
let d = diameter_wca(&self.parameters, state.temperature);
let zeta = zeta(&state.partial_density, &d);
let frac_1mz3 = -(zeta[3] - 1.0).recip();
let zeta_23 = zeta_23(&state.molefracs, &d);
state.volume * 6.0 / std::f64::consts::PI
* (zeta[1] * zeta[2] * frac_1mz3 * 3.0
+ zeta[2].powi(2) * frac_1mz3.powi(2) * zeta_23
+ (zeta[2] * zeta_23.powi(2) - zeta[0]) * (zeta[3] * (-1.0)).ln_1p())
}
}
impl fmt::Display for HardSphereWCA {
fn fmt(&self, f: &mut fmt::Formatter<'_>) -> fmt::Result {
write!(f, "Hard Sphere")
}
}
/// Dimensionless Hard-sphere diameter according to Weeks-Chandler-Andersen division.
pub(super) fn diameter_wca<D: DualNum<f64> + Copy>(
parameters: &UVParameters,
temperature: D,
) -> Array1<D> {
parameters
.sigma
.iter()
.enumerate()
.map(|(i, _b)| {
let t = temperature / parameters.epsilon_k[i];
let rm = (parameters.rep[i] / parameters.att[i])
.powf(1.0 / (parameters.rep[i] - parameters.att[i]));
let c = (parameters.rep[i] / 6.0)
.powf(-parameters.rep[i] / (12.0 - 2.0 * parameters.rep[i]))
- 1.0;
(((t.sqrt() * c + 1.0).powf(2.0 / parameters.rep[i])).recip() * rm)
* parameters.sigma[i]
})
.collect()
}
pub(super) fn dimensionless_diameter_q_wca<D: DualNum<f64> + Copy>(
t_x: D,
rep_x: D,
att_x: D,
) -> D {
let nu = rep_x;
let n = att_x;
let rs = (nu / n).powd((nu - n).recip());
let coeffs = arr1(&[
(nu * 2.0 * PI / n).sqrt(),
(nu - 7.0) * WCA_CONSTANTS_Q[0][1] + WCA_CONSTANTS_Q[0][0],
(nu - 7.0) * WCA_CONSTANTS_Q[1][1]
+ (nu - 7.0).powi(2) * WCA_CONSTANTS_Q[1][2]
+ (nu - 7.0).powi(3) * WCA_CONSTANTS_Q[1][3]
+ WCA_CONSTANTS_Q[1][0],
(nu - 7.0) * WCA_CONSTANTS_Q[2][1]
+ (nu - 7.0).powi(2) * WCA_CONSTANTS_Q[2][2]
+ (nu - 7.0).powi(3) * WCA_CONSTANTS_Q[2][3]
+ WCA_CONSTANTS_Q[2][0],
]);
(t_x.powf(2.0) * coeffs[3]
+ t_x.powf(3.0 / 2.0) * coeffs[2]
+ t_x * coeffs[1]
+ t_x.powf(1.0 / 2.0) * coeffs[0]
+ 1.0)
.powd(-(nu * 2.0).recip())
* rs
}
pub(super) fn zeta<D: DualNum<f64> + Copy>(
partial_density: &Array1<D>,
diameter: &Array1<D>,
) -> [D; 4] {
let mut zeta: [D; 4] = [D::zero(), D::zero(), D::zero(), D::zero()];
for i in 0..partial_density.len() {
for k in 0..4 {
zeta[k] +=
partial_density[i] * diameter[i].powi(k as i32) * (std::f64::consts::PI / 6.0);
}
}
zeta
}
pub(super) fn packing_fraction<D: DualNum<f64> + Copy>(
partial_density: &Array1<D>,
diameter: &Array1<D>,
) -> D {
(0..partial_density.len()).fold(D::zero(), |acc, i| {
acc + partial_density[i] * diameter[i].powi(3) * (std::f64::consts::PI / 6.0)
})
}
pub(super) fn zeta_23<D: DualNum<f64> + Copy>(molefracs: &Array1<D>, diameter: &Array1<D>) -> D {
let mut zeta: [D; 2] = [D::zero(), D::zero()];
for i in 0..molefracs.len() {
for k in 0..2 {
zeta[k] += molefracs[i] * diameter[i].powi((k + 2) as i32);
}
}
zeta[0] / zeta[1]
}
#[inline]
pub(super) fn dimensionless_length_scale<D: DualNum<f64> + Copy>(
parameters: &UVParameters,
temperature: D,
) -> Array1<D> {
parameters
.sigma
.iter()
.enumerate()
.map(|(i, _c)| {
let rs = (parameters.rep[i] / parameters.att[i])
.powf(1.0 / (parameters.rep[i] - parameters.att[i]));
-diameter_wca(parameters, temperature)[i] + rs * parameters.sigma[i]
// parameters.sigma[i]
})
.collect()
}
#[inline]
pub(super) fn packing_fraction_b<D: DualNum<f64> + Copy>(
parameters: &UVParameters,
eta: D,
temperature: D,
) -> Array2<D> {
let n = parameters.att.len();
let dimensionless_lengths = dimensionless_length_scale(parameters, temperature);
Array2::from_shape_fn((n, n), |(i, j)| {
let tau = (dimensionless_lengths[i] + dimensionless_lengths[j])
/ parameters.sigma_ij[[i, j]]
* 0.5; //dimensionless
let tau2 = tau * tau;
let c = arr1(&[
tau * WCA_CONSTANTS_ETA_B[0][0] + tau2 * WCA_CONSTANTS_ETA_B[0][1],
tau * WCA_CONSTANTS_ETA_B[1][0] + tau2 * WCA_CONSTANTS_ETA_B[1][1],
tau * WCA_CONSTANTS_ETA_B[2][0] + tau2 * WCA_CONSTANTS_ETA_B[2][1],
]);
eta + eta * c[0] + eta * eta * c[1] + eta.powi(3) * c[2]
})
}
pub(super) fn packing_fraction_b_uvb3<D: DualNum<f64> + Copy>(
parameters: &UVParameters,
eta: D,
temperature: D,
) -> Array2<D> {
let n = parameters.att.len();
let dimensionless_lengths = dimensionless_length_scale(parameters, temperature);
Array2::from_shape_fn((n, n), |(i, j)| {
let tau = (dimensionless_lengths[i] + dimensionless_lengths[j])
/ parameters.sigma_ij[[i, j]]
* 0.5; //dimensionless
let tau2 = tau * tau;
let c = arr1(&[
tau * WCA_CONSTANTS_ETA_B_UVB3[0][0] + tau2 * WCA_CONSTANTS_ETA_B_UVB3[0][1],
tau * WCA_CONSTANTS_ETA_B_UVB3[1][0] + tau2 * WCA_CONSTANTS_ETA_B_UVB3[1][1],
tau * WCA_CONSTANTS_ETA_B_UVB3[2][0] + tau2 * WCA_CONSTANTS_ETA_B_UVB3[2][1],
]);
eta + eta * c[0] + eta * eta * c[1] + eta.powi(3) * c[2]
})
}
pub(super) fn packing_fraction_a<D: DualNum<f64> + Copy>(
parameters: &UVParameters,
eta: D,
temperature: D,
) -> Array2<D> {
let dimensionless_lengths = dimensionless_length_scale(parameters, temperature);
let n = parameters.att.len();
Array2::from_shape_fn((n, n), |(i, j)| {
let tau = (dimensionless_lengths[i] + dimensionless_lengths[j])
/ parameters.sigma_ij[[i, j]]
* 0.5; //dimensionless
let tau2 = tau * tau;
let rep_inv = 1.0 / parameters.rep_ij[[i, j]];
let c = arr1(&[
tau * (WCA_CONSTANTS_ETA_A[0][0] + WCA_CONSTANTS_ETA_A[0][1] * rep_inv)
+ tau2 * (WCA_CONSTANTS_ETA_A[0][2] + WCA_CONSTANTS_ETA_A[0][3] * rep_inv),
tau * (WCA_CONSTANTS_ETA_A[1][0] + WCA_CONSTANTS_ETA_A[1][1] * rep_inv)
+ tau2 * (WCA_CONSTANTS_ETA_A[1][2] + WCA_CONSTANTS_ETA_A[1][3] * rep_inv),
tau * (WCA_CONSTANTS_ETA_A[2][0] + WCA_CONSTANTS_ETA_A[2][1] * rep_inv)
+ tau2 * (WCA_CONSTANTS_ETA_A[2][2] + WCA_CONSTANTS_ETA_A[2][3] * rep_inv),
tau * (WCA_CONSTANTS_ETA_A[3][0] + WCA_CONSTANTS_ETA_A[3][1] * rep_inv)
+ tau2 * (WCA_CONSTANTS_ETA_A[3][2] + WCA_CONSTANTS_ETA_A[3][3] * rep_inv),
]);
eta + eta * c[0] + eta * eta * c[1] + eta.powi(3) * c[2] + eta.powi(4) * c[3]
})
}
pub(super) fn packing_fraction_a_uvb3<D: DualNum<f64> + Copy>(
parameters: &UVParameters,
eta: D,
temperature: D,
) -> Array2<D> {
let dimensionless_lengths = dimensionless_length_scale(parameters, temperature);
let n = parameters.att.len();
Array2::from_shape_fn((n, n), |(i, j)| {
let tau = (dimensionless_lengths[i] + dimensionless_lengths[j])
/ parameters.sigma_ij[[i, j]]
* 0.5; //dimensionless
let tau2 = tau * tau;
let rep_inv = 1.0 / parameters.rep_ij[[i, j]];
let c = arr1(&[
tau * (WCA_CONSTANTS_ETA_A_UVB3[0][0] + WCA_CONSTANTS_ETA_A_UVB3[0][1] * rep_inv)
+ tau2
* (WCA_CONSTANTS_ETA_A_UVB3[0][2] + WCA_CONSTANTS_ETA_A_UVB3[0][3] * rep_inv),
tau * (WCA_CONSTANTS_ETA_A_UVB3[1][0] + WCA_CONSTANTS_ETA_A_UVB3[1][1] * rep_inv)
+ tau2
* (WCA_CONSTANTS_ETA_A_UVB3[1][2] + WCA_CONSTANTS_ETA_A_UVB3[1][3] * rep_inv),
tau * (WCA_CONSTANTS_ETA_A_UVB3[2][0] + WCA_CONSTANTS_ETA_A_UVB3[2][1] * rep_inv)
+ tau2
* (WCA_CONSTANTS_ETA_A_UVB3[2][2] + WCA_CONSTANTS_ETA_A_UVB3[2][3] * rep_inv),
tau * (WCA_CONSTANTS_ETA_A_UVB3[3][0] + WCA_CONSTANTS_ETA_A_UVB3[3][1] * rep_inv)
+ tau2
* (WCA_CONSTANTS_ETA_A_UVB3[3][2] + WCA_CONSTANTS_ETA_A_UVB3[3][3] * rep_inv),
]);
eta + eta * c[0] + eta * eta * c[1] + eta.powi(3) * c[2] + eta.powi(4) * c[3]
})
}
#[cfg(test)]
mod test {
use super::*;
use crate::uvtheory::parameters::utils::{
methane_parameters, test_parameters, test_parameters_mixture,
};
use approx::assert_relative_eq;
#[test]
fn test_wca_diameter() {
let p = test_parameters(24.0, 6.0, 2.0, 1.0);
let temp = 4.0;
assert_eq!(diameter_wca(&p, temp)[0] / p.sigma[0], 0.9614325601663462);
// Methane
let p = methane_parameters(24.0, 6.0);
assert_eq!(
diameter_wca(&p, 4.0 * p.epsilon_k[0])[0] / p.sigma[0],
0.9614325601663462
);
assert_eq!(
diameter_wca(&p, 4.0 * p.epsilon_k[0])[0] / p.sigma[0],
0.9614325601663462
);
assert_relative_eq!(
dimensionless_diameter_q_wca(temp, p.rep[0], p.att[0]),
0.9751576149023506,
epsilon = 1e-8
);
assert_relative_eq!(
dimensionless_length_scale(&p, 4.0 * p.epsilon_k[0])[0] / p.sigma[0],
0.11862717872596029,
epsilon = 1e-8
);
}
#[test]
fn test_hard_sphere_wca_mixture() {
let moles = arr1(&[0.40000000000000002, 0.59999999999999998]);
let reduced_temperature = 1.0;
let reduced_density = 0.90000000000000002;
let reduced_volume = (moles[0] + moles[1]) / reduced_density;
let p = test_parameters_mixture(
arr1(&[12.0, 12.0]),
arr1(&[6.0, 6.0]),
arr1(&[1.0, 1.0]),
arr1(&[1.0, 0.5]),
);
let pt = HardSphereWCA {
parameters: Arc::new(p),
};
let state = StateHD::new(reduced_temperature, reduced_volume, moles.clone());
let a = pt.helmholtz_energy(&state) / (moles[0] + moles[1]);
assert_relative_eq!(a, 3.8636904888563084, epsilon = 1e-10);
}
}