-
Notifications
You must be signed in to change notification settings - Fork 1.3k
Expand file tree
/
Copy pathsqlite.py
More file actions
650 lines (562 loc) · 21.7 KB
/
sqlite.py
File metadata and controls
650 lines (562 loc) · 21.7 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
# Copyright 2021 The Feast Authors
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# https://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import itertools
import logging
import os
import sqlite3
import sys
from datetime import date, datetime
from pathlib import Path
from typing import Any, Callable, Dict, List, Literal, Optional, Sequence, Tuple
from pydantic import StrictStr
from feast import Entity
from feast.feature_view import FeatureView
from feast.infra.infra_object import SQLITE_INFRA_OBJECT_CLASS_TYPE, InfraObject
from feast.infra.key_encoding_utils import (
deserialize_entity_key,
serialize_entity_key,
serialize_f32,
)
from feast.infra.online_stores.online_store import OnlineStore
from feast.infra.online_stores.vector_store import VectorStoreConfig
from feast.protos.feast.core.InfraObject_pb2 import InfraObject as InfraObjectProto
from feast.protos.feast.core.Registry_pb2 import Registry as RegistryProto
from feast.protos.feast.core.SqliteTable_pb2 import SqliteTable as SqliteTableProto
from feast.protos.feast.types.EntityKey_pb2 import EntityKey as EntityKeyProto
from feast.protos.feast.types.Value_pb2 import Value as ValueProto
from feast.repo_config import FeastConfigBaseModel, RepoConfig
from feast.utils import _build_retrieve_online_document_record, to_naive_utc
def adapt_date_iso(val: date):
"""Adapt datetime.date to ISO 8601 date."""
return val.isoformat()
def adapt_datetime_iso(val: datetime):
"""Adapt datetime.datetime to timezone-naive ISO 8601 date."""
return val.isoformat()
def adapt_datetime_epoch(val: datetime):
"""Adapt datetime.datetime to Unix timestamp."""
return int(val.timestamp())
sqlite3.register_adapter(date, adapt_date_iso)
sqlite3.register_adapter(datetime, adapt_datetime_iso)
sqlite3.register_adapter(datetime, adapt_datetime_epoch)
def convert_date(val: bytes):
"""Convert ISO 8601 date to datetime.date object."""
return date.fromisoformat(val.decode())
def convert_datetime(val: bytes):
"""Convert ISO 8601 datetime to datetime.datetime object."""
return datetime.fromisoformat(val.decode())
def convert_timestamp(val: bytes):
"""Convert Unix epoch timestamp to datetime.datetime object."""
return datetime.fromtimestamp(int(val))
sqlite3.register_converter("date", convert_date)
sqlite3.register_converter("datetime", convert_datetime)
sqlite3.register_converter("timestamp", convert_timestamp)
class SqliteOnlineStoreConfig(FeastConfigBaseModel, VectorStoreConfig):
"""Online store config for local (SQLite-based) store"""
type: Literal["sqlite", "feast.infra.online_stores.sqlite.SqliteOnlineStore"] = (
"sqlite"
)
""" Online store type selector"""
path: StrictStr = "data/online.db"
""" (optional) Path to sqlite db """
vector_enabled: bool = False
vector_len: Optional[int] = None
class SqliteOnlineStore(OnlineStore):
"""
SQLite implementation of the online store interface. Not recommended for production usage.
Attributes:
_conn: SQLite connection.
"""
_conn: Optional[sqlite3.Connection] = None
@staticmethod
def _get_db_path(config: RepoConfig) -> str:
assert (
config.online_store.type == "sqlite"
or config.online_store.type.endswith("SqliteOnlineStore")
)
if config.repo_path and not Path(config.online_store.path).is_absolute():
db_path = str(config.repo_path / config.online_store.path)
else:
db_path = config.online_store.path
return db_path
def _get_conn(self, config: RepoConfig):
enable_sqlite_vec = (
sys.version_info[0:2] == (3, 10) and config.online_store.vector_enabled
)
if not self._conn:
db_path = self._get_db_path(config)
self._conn = _initialize_conn(db_path, enable_sqlite_vec)
return self._conn
def online_write_batch(
self,
config: RepoConfig,
table: FeatureView,
data: List[
Tuple[
EntityKeyProto,
Dict[str, ValueProto],
datetime,
Optional[datetime],
]
],
progress: Optional[Callable[[int], Any]],
) -> None:
conn = self._get_conn(config)
project = config.project
with conn:
for entity_key, values, timestamp, created_ts in data:
entity_key_bin = serialize_entity_key(
entity_key,
entity_key_serialization_version=config.entity_key_serialization_version,
)
timestamp = to_naive_utc(timestamp)
if created_ts is not None:
created_ts = to_naive_utc(created_ts)
table_name = _table_id(project, table)
for feature_name, val in values.items():
if config.online_store.vector_enabled:
vector_bin = serialize_f32(
val.float_list_val.val, config.online_store.vector_len
) # type: ignore
conn.execute(
f"""
UPDATE {table_name}
SET value = ?, vector_value = ?, event_ts = ?, created_ts = ?
WHERE (entity_key = ? AND feature_name = ?)
""",
(
# SET
val.SerializeToString(),
vector_bin,
timestamp,
created_ts,
# WHERE
entity_key_bin,
feature_name,
),
)
conn.execute(
f"""INSERT OR IGNORE INTO {table_name}
(entity_key, feature_name, value, vector_value, event_ts, created_ts)
VALUES (?, ?, ?, ?, ?, ?)""",
(
entity_key_bin,
feature_name,
val.SerializeToString(),
vector_bin,
timestamp,
created_ts,
),
)
else:
conn.execute(
f"""
UPDATE {table_name}
SET value = ?, event_ts = ?, created_ts = ?
WHERE (entity_key = ? AND feature_name = ?)
""",
(
# SET
val.SerializeToString(),
timestamp,
created_ts,
# WHERE
entity_key_bin,
feature_name,
),
)
conn.execute(
f"""INSERT OR IGNORE INTO {table_name}
(entity_key, feature_name, value, event_ts, created_ts)
VALUES (?, ?, ?, ?, ?)""",
(
entity_key_bin,
feature_name,
val.SerializeToString(),
timestamp,
created_ts,
),
)
if progress:
progress(1)
def online_read(
self,
config: RepoConfig,
table: FeatureView,
entity_keys: List[EntityKeyProto],
requested_features: Optional[List[str]] = None,
) -> List[Tuple[Optional[datetime], Optional[Dict[str, ValueProto]]]]:
conn = self._get_conn(config)
cur = conn.cursor()
result: List[Tuple[Optional[datetime], Optional[Dict[str, ValueProto]]]] = []
# Fetch all entities in one go
cur.execute(
f"SELECT entity_key, feature_name, value, event_ts "
f"FROM {_table_id(config.project, table)} "
f"WHERE entity_key IN ({','.join('?' * len(entity_keys))}) "
f"ORDER BY entity_key",
[
serialize_entity_key(
entity_key,
entity_key_serialization_version=config.entity_key_serialization_version,
)
for entity_key in entity_keys
],
)
rows = cur.fetchall()
rows = {
k: list(group) for k, group in itertools.groupby(rows, key=lambda r: r[0])
}
for entity_key in entity_keys:
entity_key_bin = serialize_entity_key(
entity_key,
entity_key_serialization_version=config.entity_key_serialization_version,
)
res = {}
res_ts = None
for _, feature_name, val_bin, ts in rows.get(entity_key_bin, []):
val = ValueProto()
val.ParseFromString(val_bin)
res[feature_name] = val
res_ts = ts
if not res:
result.append((None, None))
else:
result.append((res_ts, res))
return result
def update(
self,
config: RepoConfig,
tables_to_delete: Sequence[FeatureView],
tables_to_keep: Sequence[FeatureView],
entities_to_delete: Sequence[Entity],
entities_to_keep: Sequence[Entity],
partial: bool,
):
conn = self._get_conn(config)
project = config.project
for table in tables_to_keep:
conn.execute(
f"CREATE TABLE IF NOT EXISTS {_table_id(project, table)} (entity_key BLOB, feature_name TEXT, value BLOB, vector_value BLOB, event_ts timestamp, created_ts timestamp, PRIMARY KEY(entity_key, feature_name))"
)
conn.execute(
f"CREATE INDEX IF NOT EXISTS {_table_id(project, table)}_ek ON {_table_id(project, table)} (entity_key);"
)
for table in tables_to_delete:
conn.execute(f"DROP TABLE IF EXISTS {_table_id(project, table)}")
def plan(
self, config: RepoConfig, desired_registry_proto: RegistryProto
) -> List[InfraObject]:
project = config.project
infra_objects: List[InfraObject] = [
SqliteTable(
path=self._get_db_path(config),
name=_table_id(project, FeatureView.from_proto(view)),
)
for view in [
*desired_registry_proto.feature_views,
*desired_registry_proto.stream_feature_views,
]
]
return infra_objects
def teardown(
self,
config: RepoConfig,
tables: Sequence[FeatureView],
entities: Sequence[Entity],
):
try:
os.unlink(self._get_db_path(config))
except FileNotFoundError:
pass
def retrieve_online_documents(
self,
config: RepoConfig,
table: FeatureView,
requested_feature: Optional[str],
requested_featuers: Optional[List[str]],
embedding: List[float],
top_k: int,
distance_metric: Optional[str] = None,
) -> List[
Tuple[
Optional[datetime],
Optional[EntityKeyProto],
Optional[ValueProto],
Optional[ValueProto],
Optional[ValueProto],
]
]:
"""
Args:
config: Feast configuration object
table: FeatureView object as the table to search
requested_feature: The requested feature as the column to search
embedding: The query embedding to search for
top_k: The number of items to return
Returns:
List of tuples containing the event timestamp, the document feature, the vector value, and the distance
"""
project = config.project
if not config.online_store.vector_enabled:
raise ValueError("sqlite-vss is not enabled in the online store config")
conn = self._get_conn(config)
cur = conn.cursor()
# Convert the embedding to a binary format instead of using SerializeToString()
query_embedding_bin = serialize_f32(embedding, config.online_store.vector_len)
table_name = _table_id(project, table)
cur.execute(
f"""
CREATE VIRTUAL TABLE vec_table using vec0(
vector_value float[{config.online_store.vector_len}]
);
"""
)
# Currently I can only insert the embedding value without crashing SQLite, will report a bug
cur.execute(
f"""
INSERT INTO vec_table(rowid, vector_value)
select rowid, vector_value from {table_name}
"""
)
cur.execute(
"""
INSERT INTO vec_table(rowid, vector_value)
VALUES (?, ?)
""",
(0, query_embedding_bin),
)
# Have to join this with the {table_name} to get the feature name and entity_key
# Also the `top_k` doesn't appear to be working for some reason
cur.execute(
f"""
select
fv.entity_key,
f.vector_value,
fv.value,
f.distance,
fv.event_ts
from (
select
rowid,
vector_value,
distance
from vec_table
where vector_value match ?
order by distance
limit ?
) f
left join {table_name} fv
on f.rowid = fv.rowid
""",
(query_embedding_bin, top_k),
)
rows = cur.fetchall()
result: List[
Tuple[
Optional[datetime],
Optional[EntityKeyProto],
Optional[ValueProto],
Optional[ValueProto],
Optional[ValueProto],
]
] = []
for entity_key, _, string_value, distance, event_ts in rows:
result.append(
_build_retrieve_online_document_record(
entity_key,
string_value if string_value else b"",
# This may be a bug
embedding,
distance,
event_ts,
config.entity_key_serialization_version,
)
)
return result
def retrieve_online_documents_v2(
self,
config: RepoConfig,
table: FeatureView,
requested_features: List[str],
query: List[float],
top_k: int,
distance_metric: Optional[str] = None,
) -> List[
Tuple[
Optional[datetime],
Optional[EntityKeyProto],
Optional[Dict[str, ValueProto]],
]
]:
"""
Retrieve documents using vector similarity search.
Args:
config: Feast configuration object
table: FeatureView object as the table to search
requested_features: List of requested features to retrieve
query: Query embedding to search for
top_k: Number of items to return
distance_metric: Distance metric to use (optional)
Returns:
List of tuples containing the event timestamp, entity key, and feature values
"""
online_store = config.online_store
if not isinstance(online_store, SqliteOnlineStoreConfig):
raise ValueError("online_store must be SqliteOnlineStoreConfig")
if not online_store.vector_enabled:
raise ValueError("Vector search is not enabled in the online store config")
conn = self._get_conn(config)
cur = conn.cursor()
online_store = config.online_store
if not isinstance(online_store, SqliteOnlineStoreConfig):
raise ValueError("online_store must be SqliteOnlineStoreConfig")
if not online_store.vector_len:
raise ValueError("vector_len is not configured in the online store config")
query_embedding_bin = serialize_f32(query, online_store.vector_len) # type: ignore
table_name = _table_id(config.project, table)
cur.execute(
f"""
CREATE VIRTUAL TABLE IF NOT EXISTS vec_table using vec0(
vector_value float[{online_store.vector_len}]
);
"""
)
cur.execute(
f"""
INSERT INTO vec_table(rowid, vector_value)
select rowid, vector_value from {table_name}
"""
)
cur.execute(
f"""
select
fv.entity_key,
fv.feature_name,
fv.value,
f.distance,
fv.event_ts,
fv.created_ts
from (
select
rowid,
vector_value,
distance
from vec_table
where vector_value match ?
order by distance
limit ?
) f
left join {table_name} fv
on f.rowid = fv.rowid
where fv.feature_name in ({",".join(["?" for _ in requested_features])})
""",
(
query_embedding_bin,
top_k,
*[f.split(":")[-1] for f in requested_features],
),
)
rows = cur.fetchall()
result: List[
Tuple[
Optional[datetime],
Optional[EntityKeyProto],
Optional[Dict[str, ValueProto]],
]
] = []
for entity_key, feature_name, value_bin, distance, event_ts, created_ts in rows:
val = ValueProto()
val.ParseFromString(value_bin)
entity_key_proto = None
if entity_key:
entity_key_proto = deserialize_entity_key(
entity_key,
entity_key_serialization_version=config.entity_key_serialization_version,
)
res = {feature_name: val}
res["distance"] = ValueProto(float_val=distance)
result.append((event_ts, entity_key_proto, res))
return result
def _initialize_conn(
db_path: str, enable_sqlite_vec: bool = False
) -> sqlite3.Connection:
Path(db_path).parent.mkdir(exist_ok=True)
db = sqlite3.connect(
db_path,
detect_types=sqlite3.PARSE_DECLTYPES | sqlite3.PARSE_COLNAMES,
check_same_thread=False,
)
if enable_sqlite_vec:
try:
import sqlite_vec # noqa: F401
except ModuleNotFoundError:
logging.warning("Cannot use sqlite_vec for vector search")
db.enable_load_extension(True)
sqlite_vec.load(db)
return db
def _table_id(project: str, table: FeatureView) -> str:
return f"{project}_{table.name}"
class SqliteTable(InfraObject):
"""
A Sqlite table managed by Feast.
Attributes:
path: The absolute path of the Sqlite file.
name: The name of the table.
conn: SQLite connection.
"""
path: str
conn: sqlite3.Connection
def __init__(self, path: str, name: str):
super().__init__(name)
self.path = path
self.conn = _initialize_conn(path)
def to_infra_object_proto(self) -> InfraObjectProto:
sqlite_table_proto = self.to_proto()
return InfraObjectProto(
infra_object_class_type=SQLITE_INFRA_OBJECT_CLASS_TYPE,
sqlite_table=sqlite_table_proto,
)
def to_proto(self) -> Any:
sqlite_table_proto = SqliteTableProto()
sqlite_table_proto.path = self.path
sqlite_table_proto.name = self.name
return sqlite_table_proto
@staticmethod
def from_infra_object_proto(infra_object_proto: InfraObjectProto) -> Any:
return SqliteTable(
path=infra_object_proto.sqlite_table.path,
name=infra_object_proto.sqlite_table.name,
)
@staticmethod
def from_proto(sqlite_table_proto: SqliteTableProto) -> Any:
return SqliteTable(
path=sqlite_table_proto.path,
name=sqlite_table_proto.name,
)
def update(self):
if sys.version_info[0:2] == (3, 10):
try:
import sqlite_vec # noqa: F401
self.conn.enable_load_extension(True)
sqlite_vec.load(self.conn)
except ModuleNotFoundError:
logging.warning("Cannot use sqlite_vec for vector search")
self.conn.execute(
f"CREATE TABLE IF NOT EXISTS {self.name} (entity_key BLOB, feature_name TEXT, value BLOB, vector_value BLOB, event_ts timestamp, created_ts timestamp, PRIMARY KEY(entity_key, feature_name))"
)
self.conn.execute(
f"CREATE INDEX IF NOT EXISTS {self.name}_ek ON {self.name} (entity_key);"
)
def teardown(self):
self.conn.execute(f"DROP TABLE IF EXISTS {self.name}")