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Copy pathcreate_fast_stacks.sh
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executable file
·44 lines (40 loc) · 1.11 KB
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USAGE="$0 --projectroot <PROJECT_ROOT> --owner <OWNER> --outputStackPrefix <PREFIX> --project YOURPROJECTNAME"
options=$(getopt -n $0 -l projectroot:,owner:,outputStackPrefix:: -- v "$@")
eval set -- "$options"
PREFIX=ACQ
while true; do
case "$1" in
--projectroot)
shift
PROJECT_ROOT=$1;;
--owner)
shift
OWNER=$1;;
--outputStackPrefix)
shift
PREFIX=$1;;
--)
shift
break;;
*)
echo $USAGE
esac
shift
done
shift $((OPTIND-1))
PROJECT=$(basename $PROJECT_ROOT)
echo $PROJECT_ROOT
echo $PROJECT
python /data/array_tomography/ForSharmi/allen_SB_code/MakeAT/make_state_table_ext_multi.py --projectDirectory $PROJECT_ROOT --outputFile $PROJECT_ROOT/scripts/statetable
docker exec -t renderapps python -m renderapps.dataimport.create_fast_stacks\
--statetableFile $PROJECT_ROOT/scripts/statetable\
--render.owner $OWNER\
--render.project $PROJECT\
--projectDirectory $PROJECT_ROOT\
--outputStackPrefix $PREFIX\
--render.host ibs-forrestc-ux1\
--render.client_scripts /var/www/render/render-ws-java-client/src/main/scripts\
--render.port 8080\
--render.memGB 10G\
--log_level INFO\
--pool_size 5