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## Chromophores
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A [http://en.wikipedia.org/wiki/Chromophore](chromophore) is the part of a molecule responsible for its color. Several proteins, such as GFP contain a chromopohre that consists of three modified residues. BioJava represents this as a single group in terms of atoms, however as three amino acids when creating the amino acid sequences.
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A [chromophore](http://en.wikipedia.org/wiki/Chromophore) is the part of a molecule responsible for its color. Several proteins, such as GFP contain a chromopohre that consists of three modified residues. BioJava represents this as a single group in terms of atoms, however as three amino acids when creating the amino acid sequences.
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```java
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