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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -12,7 +12,7 @@ RUN mkdir /data && \
1212 apt-get update && \
1313 apt-get upgrade -y --with-new-pkgs -o Dpkg::Options::="--force-confold" && \
1414 apt-get install -y \
15- # base system \
15+ # base system \
1616 cmake \
1717 g++ \
1818 gcc \
@@ -21,33 +21,33 @@ RUN mkdir /data && \
2121 make \
2222 mercurial \
2323 wget \
24- # added for... \
25- # hdf5 \
24+ # added for... \
25+ # hdf5 \
2626 zlib1g-dev \
27- # med \
28- python3-dev \
29- # parmetis \
27+ # med \
28+ python3-dev \
29+ # parmetis \
3030 libopenmpi-dev \
31- # scotch \
32- bison \
33- flex \
31+ # scotch \
32+ bison \
33+ flex \
3434 zlib1g-dev \
35- # mumps \
35+ # mumps \
3636 libopenmpi-dev \
3737 libblacs-mpi-dev \
3838 libscalapack-openmpi-dev \
3939 libopenblas-dev \
4040 python3-dev \
4141 python3-numpy \
42- # tfel
43- libboost-numpy-dev \
44- libboost-python-dev \
45- patch \
46- # asrun
42+ # tfel
43+ libboost-numpy-dev \
44+ libboost-python-dev \
45+ patch \
46+ # asrun
4747 gdb \
4848 tk \
4949 xterm \
50- && \
50+ && \
5151 locale-gen en_GB.UTF-8 en_US.UTF-8 fr_FR.UTF-8 && \
5252 update-locale LANG=en_US.UTF-8 LC_MESSAGES=POSIX
5353
@@ -212,7 +212,7 @@ RUN cd /data/codeaster/src && \
212212 export LD_LIBRARY_PATH=/scif/apps/tfel/lib && \
213213 export PYTHONPATH=/scif/apps/asrun/lib/python3.6/site-packages:/scif/apps/tfel/lib/python3.6/site-packages && \
214214 ln -s /usr/bin/python3 /usr/local/bin/python && \
215- ./waf configure --use-config=scif --enable-mpi --prefix=/scif/apps/aster --install-tests && \
215+ ./waf configure --use-config=scif --enable-mpi --enable-petsc -- prefix=/scif/apps/aster --install-tests && \
216216 ./waf install
217217
218218# clean source directory
Original file line number Diff line number Diff line change @@ -12,7 +12,7 @@ RUN mkdir /data && \
1212 apt-get update && \
1313 apt-get upgrade -y --with-new-pkgs -o Dpkg::Options::="--force-confold" && \
1414 apt-get install -y \
15- # base system \
15+ # base system \
1616 cmake \
1717 g++ \
1818 gcc \
@@ -21,28 +21,28 @@ RUN mkdir /data && \
2121 make \
2222 mercurial \
2323 wget \
24- # added for... \
25- # hdf5 \
24+ # added for... \
25+ # hdf5 \
2626 zlib1g-dev \
27- # med \
28- python3-dev \
29- # scotch \
30- bison \
31- flex \
27+ # med \
28+ python3-dev \
29+ # scotch \
30+ bison \
31+ flex \
3232 zlib1g-dev \
33- # mumps \
33+ # mumps \
3434 libopenblas-dev \
3535 python3-dev \
3636 python3-numpy \
37- # tfel
38- libboost-numpy-dev \
39- libboost-python-dev \
40- patch \
41- # asrun
37+ # tfel
38+ libboost-numpy-dev \
39+ libboost-python-dev \
40+ patch \
41+ # asrun
4242 gdb \
4343 tk \
4444 xterm \
45- && \
45+ && \
4646 locale-gen en_GB.UTF-8 en_US.UTF-8 fr_FR.UTF-8 && \
4747 update-locale LANG=en_US.UTF-8 LC_MESSAGES=POSIX
4848
@@ -172,7 +172,8 @@ RUN cd /data/codeaster/src && \
172172 export LD_LIBRARY_PATH=/scif/apps/tfel/lib && \
173173 export PYTHONPATH=/scif/apps/asrun/lib/python3.6/site-packages:/scif/apps/tfel/lib/python3.6/site-packages && \
174174 ln -s /usr/bin/python3 /usr/local/bin/python && \
175- ./waf configure --use-config=scif --prefix=/scif/apps/aster --install-tests && \
175+ INCLUDES="/scif/apps/mumps/include_seq" \
176+ ./waf configure --use-config=scif --prefix=/scif/apps/aster --install-tests && \
176177 ./waf install
177178
178179# clean source directory
Original file line number Diff line number Diff line change @@ -37,4 +37,3 @@ def configure(self):
3737 opts .enable_mumps = True
3838 opts .enable_scotch = True
3939 opts .enable_mfront = True
40- opts .enable_petsc = True
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