BioJava 3 tutorial
=================

A brief introduction into [BioJava 3](https://github.com/biojava/biojava).

== 

The goal of this tutorial is to provide an educational introduction into some of the features that are provided by BioJava. 

At the moment this tutorial is still under development. Please check  the [BioJava Cookbook](http://biojava.org/wiki/BioJava:CookBook3.0) for a more comprehensive collection of many examples of what is possible with BioJava and how to do things.

## Index

Quick [Installation](installation.md)

Book 1: [The Core module](core/README.md), basic working with sequences.

Book 2: [The Alignment module](alignment/README.md), pairwise and multiple alignments of protein sequences.

Book 3: [The Protein Structure modules](structure/README.md), everything related to working with 3D structures.

Book 4: [The Genomics Module](genomics/README.md), working with genomic data


## License

The content of this tutorial is available under the [CC-BY](http://creativecommons.org/licenses/by/3.0/) license.

[view license](license.md)

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