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1. image-analysis-smFISH image-analysis-smFISH Public

   Image Processing and Quantitative Data Analysis course UvA 2025

   Jupyter Notebook

2. rosetta-martini-gromacs-protein-md rosetta-martini-gromacs-protein-md Public

   Multi-scale molecular dynamics workflow using Rosetta, Martinize2 & Martini 3, INSANE, CG2AT in GROMACS to characterize the structural and thermodynamic impact of pathogenic variants on proteins

   C

3. Normal-Mode-analysis---ANM-GNM Normal-Mode-analysis---ANM-GNM Public

   Pipeline for analyzing impact of point mutations using elastic-network models (GNM + ANM)

   Python

4. earthdata-drought-crop-forecast earthdata-drought-crop-forecast Public

   Earth data forecasting model

   Python

5. schwab-orderbook-mapper schwab-orderbook-mapper Public

   Level II visualizer --> Streams order book + time & sales + volume data and renders a live heat map

   Python 1

6. NFL-ML NFL-ML Public

   Machine Learning model trained on NFL data

   Python