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1. image-analysis-smFISH image-analysis-smFISH Public

   Computer vision smFISH image analysis using fine tuned Cellpose segmentation models to quantify single-cell mRNA expression across treatment conditions

   Jupyter Notebook

2. rosetta-martini-gromacs-protein-md rosetta-martini-gromacs-protein-md Public

   Multi-scale molecular dynamics workflow using Rosetta, Martinize2 & Martini 3, INSANE, CG2AT in GROMACS to characterize the structural and thermodynamic impact of pathogenic variants on proteins

   C

3. earthdata-drought-crop-forecast earthdata-drought-crop-forecast Public

   Drought and crop forecasting from satellite soil moisture and precipitation data using computer vision models

   Python

4. schwab-orderbook-mapper schwab-orderbook-mapper Public

   Market data visualization tool for displaying Level-2 order book, Time & Sales, and volume data for a selected ticker using the Schwab API

   Python 1

5. osd47-spaceflight-multiomics osd47-spaceflight-multiomics Public

   HTML

6. Normal-Mode-analysis---ANM-GNM Normal-Mode-analysis---ANM-GNM Public

   Pipeline for analyzing impact of point mutations using elastic-network models (GNM + ANM)

   Python