---
layout: landing
---
				<!-- Banner -->
					<section id="banner">
						<div class="inner">
							<h2>{{ site.title }}</h2>
							<p>{{ site.description | markdownify }}</p><br>
							<ul class="actions">
								<li><a href="wiki/BioJava%3AGetStarted" class="button special">Get started</a></li>
							</ul>
						</div>
						<a href="#one" class="more scrolly">Learn More</a>
					</section>

				<!-- One -->
					<section id="one" class="wrapper style1 special">
						<div class="inner">
							<header class="major">
								<h2>Open source</h2>
								<p>The project is hosted, developed, and maintained on GitHub.</p>
								    <a href="https://github.com/biojava/biojava" class="button">GitHub project</a>
							</header>
						</div>
					</section>

				<!-- Two -->
					<section id="two" class="wrapper alt style2">
						<section class="spotlight">
							<div class="image"><img src="images/4hhb.png" alt="" /></div><div class="content">
								<h2>Protein structures</h2>
								<p>BioJava provides an API to maintain local installations of the PDB, load and manipulate structures, perform standard analysis such as sequence and structure alignments and visualize them in 3D.</p>

							</div>
						</section>
						<section class="spotlight">
							<div class="image"><img src="images/1d68.png" alt="" /></div><div class="content">
								<h2>Biological sequences</h2>
								<p>BioJava supports reading and writing popular sequence file formats, translating DNA sequences into proteins and other common bioinformatics routines.</p>
							</div>
						</section>
						<section class="spotlight">
							<div class="image"><img src="images/1ihm.png" alt="" /></div><div class="content">
								<h2>Please cite<br />
								</h2>
								  {% capture my-citation %}{% include citation-2019.md %}{% endcapture %}
								  {{ my-citation | markdownify }}
							</div>
						</section>
					</section>

				<!-- Three -->
					<section id="three" class="wrapper style1 special">
						<div class="inner">
							<header class="major">
							  <h2>Get in touch</h2>
							  <p>
							    Questions, comments, and communications regarding BioJava can be done either on <a href="https://github.com/biojava/biojava/issues">
								<span class="label">GitHub</span></a> or through the <a href="http://lists.open-bio.org/mailman/listinfo/biojava-l">
								<span class="label">BioJava mailing list</span></a>. Subscribe to stay up to date!
							    </p>
							</header>
							  <ul class="icons major">
							    <li><span class="icon fa-envelope-o major style1"></span></li>
									<li><span class="icon fa-heart-o major style2"></span></li>
								<li><span class="icon fa-code major style3"></span></li>
								</ul>

						</div>
						</section>
						<section id="three" class="wrapper style3 special">
						<div class="inner">

							<ul class="features">
								<li class="icon fa-graduation-cap">
									<h3>Tutorial</h3>
									<p>The tutorial offers an introduction into some of the features provided by BioJava.</p>
									<a href="https://github.com/biojava/biojava-tutorial" class="button">Tutorial</a>
								</li>
								<li class="icon fa-rocket">
									<h3>CookBook</h3>
									<p>The Cookbook provides simple coding recipes to common bioinformatics problems using BioJava.</p>
									<a href="wiki/BioJava%3ACookBook4.0" class="button">Cookbook</a>
								</li>
								<li class="icon fa-code">
									<h3>Javadoc API</h3>
									<p>The Javadocs for the current BioJava {{site.release.version}} release.</p>
									<a href="docs/api" class="button">Javadoc API</a></br>

								</li>
								<li class="icon fa-globe">
									<h3>Release {{ site.release.version }}</h3>
									<p>BioJava is available from Maven Central.</p>
									<a href="https://mvnrepository.com/artifact/org.biojava" class="button">Maven Central</a></br>
								</li>
								<li class="icon fa-heart-o">
									<h3>Wiki</h3>
									<p>All pages from the legacy wiki site have been migrated to markdown pages</p>
									<a href="wiki.html" class="button">View wiki</a>
								</li>
								<li class="icon fa-flag-o">
									<h3>Legacy Javadoc API</h3>
									<p>The Javadocs for BioJava legacy 1.x versions.</p>
									<a href="docs/api1.9.5/" class="button">View 1.9.5 API</a>
								</li>
							</ul>
						</div>
					</section>

				<!-- CTA -->
					<section id="cta" class="wrapper style4">
						<div class="inner">
							<header>
								<h2><img src="/images/logo/logo_favicon_250.png" height="60" style="vertical-align:middle"/> Learn More</h2>
								<p>Here a couple of pointers to get you started</p>
							</header>
							<ul class="actions vertical">
								<li><a href="wiki/BioJava%3AGetStarted" class="button fit special">Get started</a></li>
								<li><a href="https://github.com/biojava/biojava" class="button fit">Source code</a></li>
							</ul>
						</div>
					</section>