Made a couple of test platform independent

MikkelVestergaard · MikkelVestergaard · commit eadd1efc40c8 · 2018-07-28T21:49:34.000+02:00
diff --git a/biojava-alignment/src/test/java/org/biojava/nbio/alignment/TestSubOptimalMSA.java b/biojava-alignment/src/test/java/org/biojava/nbio/alignment/TestSubOptimalMSA.java
@@ -55,9 +55,9 @@ public void gapPenalty52() {
 		Profile<DNASequence, NucleotideCompound> msa = Alignments
 				.getMultipleSequenceAlignment(sequences, gapP);
 
-		assertEquals("TTGGGGCCTCTAAACGGGGTCTT\n"
-				+ "TTGGGGCCTCTAAACGGG-TCTT\n"
-				+ "TTGGGGC-TCTAA-CGGG-TCTT\n",
+		assertEquals("TTGGGGCCTCTAAACGGGGTCTT" + System.lineSeparator()
+				+ "TTGGGGCCTCTAAACGGG-TCTT"    + System.lineSeparator()
+				+ "TTGGGGC-TCTAA-CGGG-TCTT"    + System.lineSeparator(),
 				msa.toString());
 
 		ConcurrencyTools.shutdown();
@@ -71,9 +71,9 @@ public void gapPenaltyDefault() {
 				.getMultipleSequenceAlignment(sequences, gapP);
 
 		// TODO test not passing (see issue 288 in github) - Aleix 03.2016
-		assertEquals("TTGGGGCCTCTAAACGGGGTCTT\n"
-				+ "TTGGGGCCTCTAAACGGG-TCTT\n"
-				+ "TTGGGGC-TCTAA-CGGG-TCTT\n",
+		assertEquals("TTGGGGCCTCTAAACGGGGTCTT" + System.lineSeparator()
+				+ "TTGGGGCCTCTAAACGGG-TCTT"    + System.lineSeparator()
+				+ "TTGGGGC-TCTAA-CGGG-TCTT"    + System.lineSeparator(),
 				msa.toString());
 
 		ConcurrencyTools.shutdown();
diff --git a/biojava-alignment/src/test/java/org/biojava/nbio/phylo/TestForesterWrapper.java b/biojava-alignment/src/test/java/org/biojava/nbio/phylo/TestForesterWrapper.java
@@ -72,8 +72,8 @@ public void testMSAconversion() throws Exception {
 		String expected = "";
 		for (ProteinSequence proteinSequence : proteinSequences.values()) {
 			msa.addAlignedSequence(proteinSequence);
-			expected += ">" + proteinSequence.getOriginalHeader() + "\n"
-					+ proteinSequence.toString() + "\n";
+			expected += ">" + proteinSequence.getOriginalHeader() + System.lineSeparator()
+					+ proteinSequence.toString() + System.lineSeparator();
 		}
 
 		// Convert the biojava MSA to a FASTA String
@@ -95,8 +95,8 @@ public String getHeader(ProteinSequence sequence) {
 
 		StringBuilder sb = new StringBuilder();
 		for (int i = 0; i < fMsa.getNumberOfSequences(); i++) {
-			sb.append(">" + fMsa.getIdentifier(i) + "\n");
-			sb.append(fMsa.getSequenceAsString(i) + "\n");
+			sb.append(">" + fMsa.getIdentifier(i) + System.lineSeparator());
+			sb.append(fMsa.getSequenceAsString(i) + System.lineSeparator());
 		}
 		String forester = sb.toString();
 
