remove unneeded imports

emckee2006 · emckee2006 · commit 66a4f0d5351c · 2013-10-16T14:24:33.000-05:00
diff --git a/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/align/gui/ShowPDBIDListener.java b/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/align/gui/ShowPDBIDListener.java
@@ -32,9 +32,6 @@
 
 import javax.swing.JOptionPane;
 
-import javax.swing.SwingUtilities;
-
-
 import org.biojava.bio.structure.align.util.UserConfiguration;
 import org.biojava.bio.structure.align.webstart.WebStartMain;
 
diff --git a/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/align/gui/autosuggest/JAutoSuggest.java b/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/align/gui/autosuggest/JAutoSuggest.java
@@ -38,15 +38,13 @@
 import java.awt.event.MouseListener;
 import java.awt.event.WindowEvent;
 import java.awt.event.WindowListener;
-import java.util.Iterator;
 import java.util.Vector;
 import java.util.concurrent.atomic.AtomicBoolean;
 
 import javax.swing.JDialog;
 import javax.swing.JList;
 import javax.swing.JScrollPane;
 import javax.swing.JTextField;
-import javax.swing.SwingUtilities;
 import javax.swing.SwingWorker;
 
 
diff --git a/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/align/webstart/WebStartDBSearchResults.java b/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/align/webstart/WebStartDBSearchResults.java
@@ -24,7 +24,6 @@
  */
 package org.biojava.bio.structure.align.webstart;
 
-import java.io.File;
 import java.net.URL;
 
 import javax.swing.JOptionPane;
diff --git a/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/gui/util/ScopSelectPanel.java b/biojava3-structure-gui/src/main/java/org/biojava/bio/structure/gui/util/ScopSelectPanel.java
@@ -42,8 +42,6 @@
 import org.biojava.bio.structure.align.util.AtomCache;
 import org.biojava.bio.structure.align.util.UserConfiguration;
 import org.biojava.bio.structure.align.webstart.WebStartMain;
-import org.biojava.bio.structure.scop.ScopDatabase;
-import org.biojava.bio.structure.scop.ScopDomain;
 
 public class ScopSelectPanel 
 extends JPanel
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/align/ce/GuiWrapper.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/align/ce/GuiWrapper.java
@@ -1,6 +1,5 @@
 package org.biojava.bio.structure.align.ce;
 
-import java.lang.reflect.Constructor;
 import java.io.File;
 import java.lang.reflect.InvocationTargetException;
 import java.lang.reflect.Method;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/align/ce/OptimalCECPMain.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/align/ce/OptimalCECPMain.java
@@ -34,7 +34,6 @@
 import org.biojava.bio.structure.Atom;
 import org.biojava.bio.structure.StructureException;
 import org.biojava.bio.structure.StructureTools;
-import org.biojava.bio.structure.align.StructureAlignmentFactory;
 import org.biojava.bio.structure.align.ce.CeMain;
 import org.biojava.bio.structure.align.model.AFPChain;
 import org.biojava.bio.structure.align.util.AFPChainScorer;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/AssignmentXMLSerializer.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/AssignmentXMLSerializer.java
@@ -30,8 +30,6 @@
 import java.io.PrintStream;
 import java.util.HashMap;
 import java.util.Map;
-import java.util.TreeSet;
-
 import javax.xml.bind.JAXBContext;
 import javax.xml.bind.Marshaller;
 import javax.xml.bind.Unmarshaller;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/LocalProteinDomainParser.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/LocalProteinDomainParser.java
@@ -27,7 +27,6 @@
 
 import org.biojava.bio.structure.Atom;
 import org.biojava.bio.structure.Chain;
-import org.biojava.bio.structure.ResidueNumber;
 import org.biojava.bio.structure.Structure;
 import org.biojava.bio.structure.StructureException;
 import org.biojava.bio.structure.StructureTools;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/RemoteDomainProvider.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/RemoteDomainProvider.java
@@ -8,7 +8,6 @@
 import java.util.TreeSet;
 
 
-import org.biojava.bio.structure.align.ce.AbstractUserArgumentProcessor;
 import org.biojava.bio.structure.align.client.JFatCatClient;
 import org.biojava.bio.structure.align.client.StructureName;
 import org.biojava.bio.structure.align.util.HTTPConnectionTools;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/RemotePDPProvider.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/domain/RemotePDPProvider.java
@@ -35,7 +35,6 @@
 import org.biojava.bio.structure.Structure;
 
 import org.biojava.bio.structure.StructureTools;
-import org.biojava.bio.structure.align.ce.AbstractUserArgumentProcessor;
 import org.biojava.bio.structure.align.client.JFatCatClient;
 import org.biojava.bio.structure.align.client.StructureName;
 import org.biojava.bio.structure.align.util.AtomCache;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/io/mmcif/AllChemCompProvider.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/io/mmcif/AllChemCompProvider.java
@@ -11,7 +11,6 @@
 import java.util.concurrent.atomic.AtomicBoolean;
 
 
-import org.biojava.bio.structure.align.ce.AbstractUserArgumentProcessor;
 import org.biojava.bio.structure.align.util.UserConfiguration;
 import org.biojava.bio.structure.io.mmcif.model.ChemComp;
 import org.biojava3.core.util.InputStreamProvider;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/io/mmcif/SimpleMMcifConsumer.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/io/mmcif/SimpleMMcifConsumer.java
@@ -48,7 +48,6 @@
 import org.biojava.bio.structure.PDBHeader;
 import org.biojava.bio.structure.ResidueNumber;
 import org.biojava.bio.structure.Structure;
-import org.biojava.bio.structure.StructureException;
 import org.biojava.bio.structure.StructureImpl;
 import org.biojava.bio.structure.StructureTools;
 import org.biojava.bio.structure.UnknownPdbAminoAcidException;
diff --git a/biojava3-structure/src/main/java/org/biojava/bio/structure/quaternary/io/BioUnitDataProvider.java b/biojava3-structure/src/main/java/org/biojava/bio/structure/quaternary/io/BioUnitDataProvider.java
@@ -1,8 +1,6 @@
 package org.biojava.bio.structure.quaternary.io;
 
 import java.util.List;
-import java.util.Map;
-
 import org.biojava.bio.structure.Structure;
 import org.biojava.bio.structure.align.util.AtomCache;
 import org.biojava.bio.structure.quaternary.ModelTransformationMatrix;
diff --git a/biojava3-structure/src/test/java/org/biojava/bio/structure/ResidueRangeTest.java b/biojava3-structure/src/test/java/org/biojava/bio/structure/ResidueRangeTest.java
@@ -24,9 +24,6 @@
 package org.biojava.bio.structure;
 
 import static org.junit.Assert.*;
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.fail;
-
 import java.io.IOException;
 import java.util.ArrayList;
 import java.util.Iterator;
diff --git a/biojava3-structure/src/test/java/org/biojava/bio/structure/io/FastaAFPChainConverterTest.java b/biojava3-structure/src/test/java/org/biojava/bio/structure/io/FastaAFPChainConverterTest.java
@@ -25,9 +25,6 @@
 package org.biojava.bio.structure.io;
 
 import static org.junit.Assert.*;
-import static org.junit.Assert.assertEquals;
-import static org.junit.Assert.assertTrue;
-
 import java.io.BufferedWriter;
 import java.io.File;
 import java.io.FileReader;
@@ -38,7 +35,6 @@
 import org.biojava.bio.structure.Structure;
 import org.biojava.bio.structure.StructureException;
 import org.biojava.bio.structure.StructureTools;
-import org.biojava.bio.structure.align.model.AFP;
 import org.biojava.bio.structure.align.model.AFPChain;
 import org.biojava.bio.structure.align.util.AtomCache;
 import org.biojava.bio.structure.align.xml.AFPChainXMLConverter;
diff --git a/integrationtest/src/test/java/org/biojava/bio/structure/TestSECalignment.java b/integrationtest/src/test/java/org/biojava/bio/structure/TestSECalignment.java
@@ -34,9 +34,6 @@
 import org.biojava.bio.structure.align.util.AtomCache;
 import org.biojava.bio.structure.align.xml.AFPChainXMLConverter;
 import org.biojava.bio.structure.align.xml.AFPChainXMLParser;
-import org.biojava.bio.structure.io.mmcif.ChemCompGroupFactory;
-import org.biojava.bio.structure.io.mmcif.ChemCompProvider;
-import org.biojava.bio.structure.io.mmcif.DownloadChemCompProvider;
 import org.biojava.bio.structure.util.StringManipulationTestsHelper;
 import org.biojava3.core.util.StringManipulationHelper;
 
diff --git a/integrationtest/src/test/java/org/biojava/bio/structure/cath/CathTest.java b/integrationtest/src/test/java/org/biojava/bio/structure/cath/CathTest.java
@@ -25,17 +25,8 @@
 
 import junit.framework.TestCase;
 
-import org.biojava.bio.structure.align.client.StructureName;
-import org.biojava.bio.structure.align.util.UserConfiguration;
-import org.junit.BeforeClass;
 import org.junit.Test;
 
-import java.text.DateFormat;
-import java.text.ParseException;
-import java.text.SimpleDateFormat;
-import java.util.ArrayList;
-import java.util.List;
-
 /**
  * @author Daniel Asarnow
  */
