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heuermhjosemduarte
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Fixes for jdk8 javadoc errors
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  • biojava-sequencing/src/main/java/org/biojava/nbio/sequencing/io/fastq

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biojava-sequencing/src/main/java/org/biojava/nbio/sequencing/io/fastq/package-info.java

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/**
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* FASTQ and variants sequence format I/O.
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*
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* <p>
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* <br><br>
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* To read from an Illumina variant FASTQ sequence file:
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* <pre>
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* FastqReader reader = new IlluminaFastqReader();
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* // ...
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* }
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* </pre>
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* </p>
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*
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* <p>
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* To write to an Sanger variant FASTQ sequence file:
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* <pre>
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* Collection&lt;Fastq&gt; fastq = ...;
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* SangerFastqWriter writer = new SangerFastqWriter();
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* writer.write(new File("sanger.fastq"), fastq);
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* </pre>
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* </p>
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*
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* <p>
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* For further documentation on the FASTQ sequence format,
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* its variants, and how they are handled in O|B|F projects,
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* see:
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* </p>
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*
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* <p>
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* <br><br>
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* <a href="http://dx.doi.org/10.1093/nar/gkp1137">The Sanger FASTQ file format for sequences
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* with quality scores, and the Solexa/Illumina FASTQ variants</a><br/>
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* with quality scores, and the Solexa/Illumina FASTQ variants</a><br>
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* Peter J. A. Cock (Biopython), Christopher J. Fields (BioPerl), Naohisa Goto (BioRuby),
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* Michael L. Heuer (BioJava) and Peter M. Rice (EMBOSS).<br/>
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* Michael L. Heuer (BioJava) and Peter M. Rice (EMBOSS).<br>
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* Nucleic Acids Research, <a href="http://dx.doi.org/10.1093/nar/gkp1137">doi:10.1093/nar/gkp1137</a>
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* </p>
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*
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* @since 3.0.3
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*/

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