Skip to content

Commit 419d5f0

Browse files
committed
Minor Miscellaneous formatting and import
1 parent 9da6f27 commit 419d5f0

File tree

2 files changed

+10
-8
lines changed
  • biojava-modfinder/src/main/java/org/biojava/nbio/phosphosite
  • biojava-structure/src/main/java/org/biojava/nbio/structure/io

2 files changed

+10
-8
lines changed

biojava-modfinder/src/main/java/org/biojava/nbio/phosphosite/Dataset.java

Lines changed: 9 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -20,19 +20,21 @@
2020
*/
2121
package org.biojava.nbio.phosphosite;
2222

23-
import org.biojava.nbio.structure.align.util.AtomCache;
24-
import org.slf4j.Logger;
25-
import org.slf4j.LoggerFactory;
26-
27-
import java.io.*;
23+
import java.io.BufferedInputStream;
24+
import java.io.File;
25+
import java.io.FileOutputStream;
26+
import java.io.IOException;
27+
import java.io.InputStream;
2828
import java.net.URL;
2929
import java.nio.file.Files;
3030
import java.nio.file.StandardCopyOption;
31-
import java.util.ArrayList;
3231
import java.util.Arrays;
3332
import java.util.List;
3433
import java.util.stream.Collectors;
35-
import java.util.stream.Stream;
34+
35+
import org.biojava.nbio.structure.align.util.AtomCache;
36+
import org.slf4j.Logger;
37+
import org.slf4j.LoggerFactory;
3638

3739
/**
3840
* Phosphosite is available under the PhosphoSitePlus® is licensed under Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License and is freely available for non-commercial purposes from

biojava-structure/src/main/java/org/biojava/nbio/structure/io/PDBFileParser.java

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -1931,7 +1931,7 @@ private void pdb_ATOM_Handler(String line) {
19311931

19321932

19331933

1934-
}
1934+
}
19351935

19361936

19371937
private Group getCorrectAltLocGroup( Character altLoc,

0 commit comments

Comments
 (0)