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| 1 | +ARG BUILD_ON_IMAGE=glcr.b-data.ch/python/base |
| 2 | +ARG PYTHON_VERSION=3.11.10 |
| 3 | +ARG QUARTO_VERSION=1.5.57 |
| 4 | +ARG CTAN_REPO=https://mirror.ctan.org/systems/texlive/tlnet |
| 5 | + |
| 6 | +FROM ${BUILD_ON_IMAGE}${PYTHON_VERSION:+:$PYTHON_VERSION} |
| 7 | + |
| 8 | +ARG DEBIAN_FRONTEND=noninteractive |
| 9 | + |
| 10 | +ARG BUILD_ON_IMAGE |
| 11 | +ARG QUARTO_VERSION |
| 12 | +ARG CTAN_REPO |
| 13 | +ARG CTAN_REPO_BUILD_LATEST |
| 14 | +ARG BUILD_START |
| 15 | + |
| 16 | +ENV PARENT_IMAGE=${BUILD_ON_IMAGE}${PYTHON_VERSION:+:$PYTHON_VERSION} \ |
| 17 | + QUARTO_VERSION=${QUARTO_VERSION} \ |
| 18 | + BUILD_DATE=${BUILD_START} |
| 19 | + |
| 20 | +ENV PATH=/opt/TinyTeX/bin/linux:/opt/quarto/bin:$PATH |
| 21 | + |
| 22 | +RUN dpkgArch="$(dpkg --print-architecture)" \ |
| 23 | + && apt-get update \ |
| 24 | + && apt-get install -y --no-install-recommends \ |
| 25 | + fonts-roboto \ |
| 26 | + ghostscript \ |
| 27 | + librsvg2-bin \ |
| 28 | + qpdf \ |
| 29 | + texinfo \ |
| 30 | + ## Python: For h5py wheels (arm64) |
| 31 | + libhdf5-dev \ |
| 32 | + ## Install quarto |
| 33 | + && curl -sLO https://github.com/quarto-dev/quarto-cli/releases/download/v${QUARTO_VERSION}/quarto-${QUARTO_VERSION}-linux-${dpkgArch}.tar.gz \ |
| 34 | + && mkdir -p /opt/quarto \ |
| 35 | + && tar -xzf quarto-${QUARTO_VERSION}-linux-${dpkgArch}.tar.gz -C /opt/quarto --no-same-owner --strip-components=1 \ |
| 36 | + && rm quarto-${QUARTO_VERSION}-linux-${dpkgArch}.tar.gz \ |
| 37 | + ## Remove quarto pandoc |
| 38 | + && rm /opt/quarto/bin/tools/$(uname -m)/pandoc \ |
| 39 | + ## Link to system pandoc |
| 40 | + && ln -s /usr/bin/pandoc /opt/quarto/bin/tools/$(uname -m)/pandoc \ |
| 41 | + ## Tell APT about the TeX Live installation |
| 42 | + ## by building a dummy package using equivs |
| 43 | + && apt-get install -y --no-install-recommends equivs \ |
| 44 | + && cd /tmp \ |
| 45 | + && wget https://github.com/scottkosty/install-tl-ubuntu/raw/master/debian-control-texlive-in.txt \ |
| 46 | + && equivs-build debian-* \ |
| 47 | + && mv texlive-local*.deb texlive-local.deb \ |
| 48 | + && dpkg -i texlive-local.deb \ |
| 49 | + && apt-get -y purge equivs \ |
| 50 | + && apt-get -y autoremove \ |
| 51 | + ## Admin-based install of TinyTeX |
| 52 | + && CTAN_REPO_ORIG=${CTAN_REPO} \ |
| 53 | + && CTAN_REPO=${CTAN_REPO_BUILD_LATEST:-$CTAN_REPO} \ |
| 54 | + && export CTAN_REPO \ |
| 55 | + && wget -qO- "https://yihui.org/tinytex/install-unx.sh" \ |
| 56 | + | sh -s - --admin --no-path \ |
| 57 | + && mv ${HOME}/.TinyTeX /opt/TinyTeX \ |
| 58 | + && sed -i "s|${HOME}/.TinyTeX|/opt/TinyTeX|g" \ |
| 59 | + /opt/TinyTeX/texmf-var/fonts/conf/texlive-fontconfig.conf \ |
| 60 | + && ln -rs /opt/TinyTeX/bin/$(uname -m)-linux \ |
| 61 | + /opt/TinyTeX/bin/linux \ |
| 62 | + && /opt/TinyTeX/bin/linux/tlmgr path add \ |
| 63 | + && tlmgr update --self \ |
| 64 | + ## TeX packages as requested by the community |
| 65 | + && curl -sSLO https://yihui.org/gh/tinytex/tools/pkgs-yihui.txt \ |
| 66 | + && tlmgr install $(cat pkgs-yihui.txt | tr '\n' ' ') \ |
| 67 | + && rm -f pkgs-yihui.txt \ |
| 68 | + ## TeX packages as in rocker/verse |
| 69 | + && tlmgr install \ |
| 70 | + context \ |
| 71 | + pdfcrop \ |
| 72 | + ## TeX packages as in jupyter/scipy-notebook |
| 73 | + && tlmgr install \ |
| 74 | + cm-super \ |
| 75 | + dvipng \ |
| 76 | + ## TeX packages specific for nbconvert |
| 77 | + && tlmgr install \ |
| 78 | + oberdiek \ |
| 79 | + titling \ |
| 80 | + && tlmgr path add \ |
| 81 | + && tlmgr option repository ${CTAN_REPO_ORIG} \ |
| 82 | + && chown -R root:${NB_GID} /opt/TinyTeX \ |
| 83 | + && chmod -R g+w /opt/TinyTeX \ |
| 84 | + && chmod -R g+wx /opt/TinyTeX/bin \ |
| 85 | + ## Make the TeX Live fonts available as system fonts |
| 86 | + && cp /opt/TinyTeX/texmf-var/fonts/conf/texlive-fontconfig.conf \ |
| 87 | + /etc/fonts/conf.d/09-texlive.conf \ |
| 88 | + && fc-cache -fsv \ |
| 89 | + ## Install Python packages |
| 90 | + && export PIP_BREAK_SYSTEM_PACKAGES=1 \ |
| 91 | + && pip install \ |
| 92 | + altair \ |
| 93 | + beautifulsoup4 \ |
| 94 | + bokeh \ |
| 95 | + bottleneck \ |
| 96 | + cloudpickle \ |
| 97 | + cython \ |
| 98 | + dask \ |
| 99 | + dill \ |
| 100 | + h5py \ |
| 101 | + #ipympl \ |
| 102 | + #ipywidgets \ |
| 103 | + matplotlib \ |
| 104 | + numba \ |
| 105 | + numexpr \ |
| 106 | + numpy \ |
| 107 | + pandas \ |
| 108 | + patsy \ |
| 109 | + protobuf \ |
| 110 | + scikit-image \ |
| 111 | + scikit-learn \ |
| 112 | + scipy \ |
| 113 | + seaborn \ |
| 114 | + sqlalchemy \ |
| 115 | + statsmodels \ |
| 116 | + sympy \ |
| 117 | + tables \ |
| 118 | + #widgetsnbextension \ |
| 119 | + xlrd \ |
| 120 | + ## Install facets |
| 121 | + #&& cd /tmp \ |
| 122 | + #&& git clone https://github.com/PAIR-code/facets.git \ |
| 123 | + #&& jupyter nbextension install facets/facets-dist/ --sys-prefix \ |
| 124 | + #&& cd / \ |
| 125 | + ## Clean up |
| 126 | + && rm -rf /tmp/* \ |
| 127 | + && rm -rf /var/lib/apt/lists/* \ |
| 128 | + ${HOME}/.cache \ |
| 129 | + ${HOME}/.config \ |
| 130 | + ${HOME}/.local \ |
| 131 | + ${HOME}/.wget-hsts |
| 132 | + |
| 133 | +ENV CTAN_REPO=${CTAN_REPO} |
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