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# Licensed under a 3-clause BSD style license - see LICENSE.rst
"""
Astropy is a package intended to contain core functionality and some
common tools needed for performing astronomy and astrophysics research with
Python. It also provides an index for other astronomy packages and tools for
managing them.
"""
from __future__ import absolute_import
# this indicates whether or not we are in astropy's setup.py
try:
_ASTROPY_SETUP_
except NameError:
from sys import version_info
if version_info[0] >= 3:
import builtins
else:
import __builtin__ as builtins
builtins._ASTROPY_SETUP_ = False
del version_info
del builtins
try:
from .version import version as __version__
except ImportError:
# TODO: Issue a warning using the logging framework
__version__ = ''
try:
from .version import githash as __githash__
except ImportError:
# TODO: Issue a warning using the logging framework
__githash__ = ''
__minimum_numpy_version__ = '1.6.0'
# The location of the online documentation for astropy
# This location will normally point to the current released version of astropy
if 'dev' in __version__:
online_docs_root = 'http://docs.astropy.org/en/latest/'
else:
online_docs_root = 'http://docs.astropy.org/en/{0}/'.format(__version__)
def _check_numpy():
"""
Check that Numpy is installed and it is of the minimum version we
require.
"""
# Note: We could have used distutils.version for this comparison,
# but it seems like overkill to import distutils at runtime.
requirement_met = False
try:
import numpy
except ImportError:
pass
else:
from .utils import minversion
requirement_met = minversion(numpy, __minimum_numpy_version__)
if not requirement_met:
msg = ("Numpy version {0} or later must be installed to use "
"Astropy".format(__minimum_numpy_version__))
raise ImportError(msg)
return numpy
if not _ASTROPY_SETUP_:
_check_numpy()
from . import config as _config
import sys
class Conf(_config.ConfigNamespace):
"""
Configuration parameters for `astropy`.
"""
unicode_output = _config.ConfigItem(
False,
'When True, use Unicode characters when outputting values, and '
'displaying widgets at the console.')
use_color = _config.ConfigItem(
sys.platform != 'win32',
'When True, use ANSI color escape sequences when writing to the console.',
aliases=['astropy.utils.console.USE_COLOR', 'astropy.logger.USE_COLOR'])
max_lines = _config.ConfigItem(
None,
description='Maximum number of lines in the display of pretty-printed '
'objects. If not provided, try to determine automatically from the '
'terminal size. Negative numbers mean no limit.',
cfgtype='integer(default=None)',
aliases=['astropy.table.pprint.max_lines'])
max_width = _config.ConfigItem(
None,
description='Maximum number of characters per line in the display of '
'pretty-printed objects. If not provided, try to determine '
'automatically from the terminal size. Negative numbers mean no '
'limit.',
cfgtype='integer(default=None)',
aliases=['astropy.table.pprint.max_width'])
conf = Conf()
UNICODE_OUTPUT = _config.ConfigAlias(
'0.4', 'UNICODE_OUTPUT', 'unicode_output')
del sys
# set up the test command
def _get_test_runner():
from .tests.helper import TestRunner
return TestRunner(__path__[0])
def test(package=None, test_path=None, args=None, plugins=None,
verbose=False, pastebin=None, remote_data=False, pep8=False,
pdb=False, open_files=False, parallel=0, docs_path=None,
skip_docs=False, repeat=None):
"""
Run Astropy tests using py.test. A proper set of arguments is
constructed and passed to `pytest.main`.
Parameters
----------
package : str, optional
The name of a specific package to test, e.g. 'io.fits' or 'utils'.
If nothing is specified all default Astropy tests are run.
test_path : str, optional
Specify location to test by path. May be a single file or
directory. Must be specified absolutely or relative to the
calling directory.
args : str, optional
Additional arguments to be passed to `pytest.main` in the `args`
keyword argument.
plugins : list, optional
Plugins to be passed to `pytest.main` in the `plugins` keyword
argument.
verbose : bool, optional
Convenience option to turn on verbose output from py.test. Passing
True is the same as specifying `-v` in `args`.
pastebin : {'failed','all',None}, optional
Convenience option for turning on py.test pastebin output. Set to
'failed' to upload info for failed tests, or 'all' to upload info
for all tests.
remote_data : bool, optional
Controls whether to run tests marked with @remote_data. These
tests use online data and are not run by default. Set to True to
run these tests.
pep8 : bool, optional
Turn on PEP8 checking via the pytest-pep8 plugin and disable normal
tests. Same as specifying `--pep8 -k pep8` in `args`.
pdb : bool, optional
Turn on PDB post-mortem analysis for failing tests. Same as
specifying `--pdb` in `args`.
open_files : bool, optional
Fail when any tests leave files open. Off by default, because
this adds extra run time to the test suite. Requires the
``psutil`` package.
parallel : int, optional
When provided, run the tests in parallel on the specified
number of CPUs. If parallel is negative, it will use the all
the cores on the machine. Requires the `pytest-xdist` plugin.
docs_path : str, optional
The path to the documentation .rst files.
skip_docs : bool, optional
When `True`, skips running the doctests in the .rst files.
repeat : int, optional
If set, specifies how many times each test should be run. This is
useful for diagnosing sporadic failures.
See Also
--------
pytest.main : py.test function wrapped by `run_tests`.
"""
test_runner = _get_test_runner()
return test_runner.run_tests(
package=package, test_path=test_path, args=args,
plugins=plugins, verbose=verbose, pastebin=pastebin,
remote_data=remote_data, pep8=pep8, pdb=pdb,
open_files=open_files, parallel=parallel, docs_path=docs_path,
skip_docs=skip_docs, repeat=repeat)
# if we are *not* in setup mode, import the logger and possibly populate the
# configuration file with the defaults
def _initialize_astropy():
from . import config
import os
import sys
from warnings import warn
# If this __init__.py file is in ./astropy/ then import is within a source dir
source_dir = os.path.abspath(os.path.dirname(__file__))
is_astropy_source_dir = (
os.path.exists(os.path.join(source_dir, os.pardir, '.git')) and
os.path.isfile(os.path.join(source_dir, os.pardir, 'setup.py')))
def _rollback_import(message):
log.error(message)
# Now disable exception logging to avoid an annoying error in the
# exception logger before we raise the import error:
_teardown_log()
# Roll back any astropy sub-modules that have been imported thus
# far
for key in list(sys.modules):
if key.startswith('astropy.'):
del sys.modules[key]
raise ImportError('astropy')
try:
from .utils import _compiler
except ImportError:
if is_astropy_source_dir:
log.warn('You appear to be trying to import astropy from '
'within a source checkout without building the '
'extension modules first. Attempting to (re)build '
'extension modules:')
try:
_rebuild_extensions()
except:
_rollback_import(
'An error occurred while attempting to rebuild the '
'extension modules. Please try manually running '
'`./setup.py develop` or `./setup.py build_ext '
'--inplace` to see what the issue was. Extension '
'modules must be successfully compiled and importable '
'in order to import astropy.')
else:
# Outright broken installation; don't be nice.
raise
# add these here so we only need to cleanup the namespace at the end
config_dir = os.path.dirname(__file__)
try:
config.configuration.update_default_config(__package__, config_dir)
except config.configuration.ConfigurationDefaultMissingError as e:
wmsg = (e.args[0] + " Cannot install default profile. If you are "
"importing from source, this is expected.")
warn(config.configuration.ConfigurationDefaultMissingWarning(wmsg))
def _rebuild_extensions():
import os
import subprocess
import sys
import time
from .utils.console import Spinner
from .extern.six import next
devnull = open(os.devnull, 'w')
old_cwd = os.getcwd()
os.chdir(os.path.join(os.path.dirname(__file__), os.pardir))
try:
sp = subprocess.Popen([sys.executable, 'setup.py', 'build_ext',
'--inplace'], stdout=devnull,
stderr=devnull)
with Spinner('Rebuilding extension modules') as spinner:
while sp.poll() is None:
next(spinner)
time.sleep(0.05)
finally:
os.chdir(old_cwd)
if sp.returncode != 0:
raise OSError('Running setup.py build_ext --inplace failed '
'with error code {0}: try rerunning this command '
'manually to check what the error was.'.format(
sp.returncode))
# Set the bibtex entry to the article referenced in CITATION
def _get_bibtex():
import os
import re
if os.path.exists('CITATION'):
with open('CITATION', 'r') as citation:
refcontents = re.findall(r'\{[^()]*\}', citation.read())[0]
bibtexreference = "@ARTICLE{0}".format(refcontents)
return bibtexreference
else:
return ''
__bibtex__ = _get_bibtex()
import logging
# Use the root logger as a dummy log before initilizing Astropy's logger
log = logging.getLogger()
if not _ASTROPY_SETUP_:
from .logger import _init_log, _teardown_log
log = _init_log()
_initialize_astropy()
from .utils.misc import find_api_page