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setup_nonlocal.cpp
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459 lines (393 loc) · 15.1 KB
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#include "setup_nonlocal.h"
#include "source_base/parallel_common.h"
#include "source_io/module_parameter/parameter.h"
#ifdef __LCAO
#include "source_pw/module_pwdft/soc.h"
// mohan add 2013-08-02
// In order to get rid of the read in file .NONLOCAL.
InfoNonlocal::InfoNonlocal()
{
this->Beta = new Numerical_Nonlocal[1];
this->nproj = nullptr;
this->nprojmax = 0;
this->rcutmax_Beta = 0.0;
}
InfoNonlocal::~InfoNonlocal()
{
delete[] Beta;
delete[] nproj;
}
#include "../source_base/complexmatrix.h"
void InfoNonlocal::Set_NonLocal(const int& it,
Atom* atom,
int& n_projectors,
const int& kmesh,
const double& dk,
const double& dr_uniform,
std::ofstream& log)
{
ModuleBase::TITLE("InfoNonlocal", "Set_NonLocal");
// set a pointer
// Atom* atom = &ucell.atoms[it];
// get the number of non-local projectors
n_projectors = atom->ncpp.nbeta;
const int nh = atom->ncpp.nh; // zhengdy-soc
// set the nonlocal projector objects
Numerical_Nonlocal_Lm* tmpBeta_lm = new Numerical_Nonlocal_Lm[n_projectors];
ModuleBase::ComplexMatrix coefficient_D_nc_in(nh * 2, nh * 2); // zhengdy-soc
int lmaxkb = -1;
for (int ibeta = 0; ibeta < atom->ncpp.nbeta; ibeta++)
{
lmaxkb = std::max(lmaxkb, atom->ncpp.lll[ibeta]);
}
Soc soc;
if (atom->ncpp.has_so)
{
soc.rot_ylm(lmaxkb);
soc.fcoef.create(1, atom->ncpp.nh, atom->ncpp.nh);
}
int ip1 = 0;
for (int p1 = 0; p1 < n_projectors; p1++) // nbeta
{
const int lnow = atom->ncpp.lll[p1];
const int l1 = atom->ncpp.lll[p1];
const double j1 = atom->ncpp.jjj[p1];
for (int m1 = 0; m1 < 2 * l1 + 1; m1++)
{
int ip2 = 0;
for (int p2 = 0; p2 < n_projectors; p2++)
{
const int l2 = atom->ncpp.lll[p2];
const double j2 = atom->ncpp.jjj[p2];
for (int m2 = 0; m2 < 2 * l2 + 1; m2++)
{
if (l1 == l2 && fabs(j1 - j2) < 1e-7)
{
for (int is1 = 0; is1 < 2; is1++)
{
for (int is2 = 0; is2 < 2; is2++)
{
if (atom->ncpp.has_so)
{
soc.set_fcoef(l1, l2, is1, is2, m1, m2, j1, j2, 0, ip1, ip2);
coefficient_D_nc_in(ip1 + nh * is1, ip2 + nh * is2)
= atom->ncpp.dion(p1, p2) * soc.fcoef(0, is1, is2, ip1, ip2);
if (p1 != p2)
{
soc.fcoef(0, is1, is2, ip1, ip2) = std::complex<double>(0.0, 0.0);
}
}
else
{
if (is1 == is2 && m1 == m2)
{
coefficient_D_nc_in(ip1 + nh * is1, ip2 + nh * is2) = atom->ncpp.dion(p1, p2);
}
}
} // end is2
} // end is1
} // end l1==l2
ip2++;
} // end m2
} // end p2
assert(ip2 == nh);
ip1++;
} // end m1
// only keep the nonzero part.
int cut_mesh = atom->ncpp.mesh;
for (int ir = atom->ncpp.mesh - 1; ir >= 0; --ir)
{
if (std::abs(atom->ncpp.betar(p1, ir)) > 1.0e-10)
{
cut_mesh = ir;
break;
}
}
if (cut_mesh % 2 == 0)
{
++cut_mesh;
}
double* beta_r = new double[cut_mesh];
ModuleBase::GlobalFunc::ZEROS(beta_r, cut_mesh);
for (int ir = 0; ir < cut_mesh; ++ir)
{
beta_r[ir] = atom->ncpp.betar(p1, ir);
}
tmpBeta_lm[p1].set_NL_proj(atom->label,
it, // type
lnow, // angular momentum L
cut_mesh, // number of radial mesh
atom->ncpp.rab.data(),
atom->ncpp.r.data(), // radial mesh value (a.u.)
beta_r,
kmesh,
dk,
dr_uniform); // delta k mesh in reciprocal space
if (PARAM.inp.out_element_info) {
tmpBeta_lm[p1].plot(GlobalV::MY_RANK);
}
delete[] beta_r;
}
assert(ip1 == nh);
this->Beta[it].set_type_info(it,
atom->label,
atom->ncpp.pp_type,
atom->ncpp.lmax,
n_projectors,
tmpBeta_lm); // zhengdy-soc 2018-09-10
// mohan add 2021-05-07
atom->ncpp.set_d_so(coefficient_D_nc_in, n_projectors, nh, atom->ncpp.has_so);
delete[] tmpBeta_lm;
log << " SET NONLOCAL PSEUDOPOTENTIAL PROJECTORS FOR ELEMENT " << atom->label << std::endl;
return;
}
void InfoNonlocal::Read_NonLocal(const int& it,
Atom* atom,
int& n_projectors,
const int& my_rank,
const int& kmesh,
const double& dk,
const double& dr_uniform,
const std::string& nonlocalFile)
{
ModuleBase::TITLE("InfoNonlocal", "Read_NonLocal");
std::ifstream ifs;
// mohan add 2010-09-08.
// check if the non-local pseudopotential file exist.
bool open = false;
if (my_rank == 0)
{
ifs.open(nonlocalFile.c_str());
if (ifs)
{
open = true;
}
}
#ifdef __MPI
Parallel_Common::bcast_bool(open);
#endif
if (!open)
{
std::cout << " Non-local File : " << nonlocalFile << std::endl;
ModuleBase::WARNING_QUIT("InfoNonlocal::Read_NonLocal", "Can not find the NONLOCAL file.");
}
else
{
// GlobalV::ofs_running << " Open nonlocal pseudopotential file: " << nonlocalFile << std::endl;
}
std::string label;
std::string ps_type;
// maximal lmax allowed in this calculation
int nlmax = 0;
if (my_rank == 0)
{
if (ModuleBase::GlobalFunc::SCAN_BEGIN(ifs, "<HEADER>"))
{
ModuleBase::GlobalFunc::READ_VALUE(ifs, label);
ModuleBase::GlobalFunc::READ_VALUE(ifs, ps_type);
if (ps_type != "NC")
{
ModuleBase::WARNING_QUIT("InfoNonlocal::Read_NonLocal",
"Only available for NC nonlocal pseudopotential");
}
ModuleBase::GlobalFunc::READ_VALUE(ifs, nlmax);
// std::cout << " " << label << " " << ps_type << " " << nlmax << std::endl;
assert(nlmax >= -1);
ModuleBase::GlobalFunc::SCAN_END(ifs, "</HEADER>");
}
}
#ifdef __MPI
Parallel_Common::bcast_string(label);
Parallel_Common::bcast_string(ps_type);
Parallel_Common::bcast_int(nlmax);
#endif
// mohan add 2012-06-09
if (nlmax != -1)
{
bool find_lmax = false;
for (int ic = 0; ic < atom->ncpp.nbeta; ic++)
{
if (nlmax == atom->ncpp.lll[ic])
{
find_lmax = true;
break;
}
}
if (!find_lmax)
{
std::cout << " For element " << label << std::endl;
std::cout << " Max L Read in from NONLOCAL = " << nlmax << std::endl;
for (int ib = 0; ib < atom->ncpp.nbeta; ++ib)
{
std::cout << " Max L Read in from pseudopotential file = " << atom->ncpp.lll[ib] << std::endl;
}
ModuleBase::WARNING_QUIT("InfoNonlocal::Read_NonLocal", "nlmax != atom->lll");
}
}
ModuleBase::GlobalFunc::OUT(GlobalV::ofs_running, "label", label);
ModuleBase::GlobalFunc::OUT(GlobalV::ofs_running, "nlmax", nlmax);
//-------------------------------------------
// if each L has projectors more than once,
// this needed to be modified.
//-------------------------------------------
int nproj_allowed = nlmax + 1;
ModuleBase::matrix coefficient_D_in(nproj_allowed, nproj_allowed);
ModuleBase::ComplexMatrix coefficient_D_nc_in(nproj_allowed * 2, nproj_allowed * 2);
if (my_rank == 0)
{
if (ModuleBase::GlobalFunc::SCAN_BEGIN(ifs, "<DIJ>"))
{
//--------------------------------------
// this parameter is very important!!!
//--------------------------------------
ModuleBase::GlobalFunc::READ_VALUE(ifs, n_projectors);
ModuleBase::GlobalFunc::OUT(GlobalV::ofs_running, "n_projectors", n_projectors);
for (int p1 = 0; p1 < n_projectors; p1++)
{
for (int p2 = 0; p2 < n_projectors; p2++)
{
int L1_read, L2_read;
ifs >> L1_read >> L2_read;
assert(L1_read <= nlmax);
assert(L2_read <= nlmax);
ifs >> coefficient_D_in(L1_read, L2_read);
}
}
ModuleBase::GlobalFunc::SCAN_END(ifs, "</DIJ>");
}
}
#ifdef __MPI
Parallel_Common::bcast_int(n_projectors); // mohan add 2010-12-20
#endif
Numerical_Nonlocal_Lm* tmpBeta_lm = new Numerical_Nonlocal_Lm[n_projectors];
int* LfromBeta = new int[n_projectors];
ModuleBase::GlobalFunc::ZEROS(LfromBeta, n_projectors);
for (int p1 = 0; p1 < n_projectors; p1++)
{
int meshr_ps = 0;
if (my_rank == 0)
{
if (ModuleBase::GlobalFunc::SCAN_BEGIN(ifs, "<PP_BETA>", false))
{
int iproj = 0;
ModuleBase::GlobalFunc::READ_VALUE(ifs, iproj);
if (iproj != p1)
{
std::cout << " iproj=" << iproj << " p1=" << p1 << std::endl;
ModuleBase::WARNING_QUIT("InfoNonlocal::Read_NonLocal", "Check non-local projector index.");
}
ModuleBase::GlobalFunc::READ_VALUE(ifs, LfromBeta[p1]);
assert(LfromBeta[p1] >= 0);
assert(LfromBeta[p1] <= nlmax);
ModuleBase::GlobalFunc::READ_VALUE(ifs, meshr_ps);
if (meshr_ps % 2 == 0)
{
std::cout << " meshr_ps = " << meshr_ps << std::endl;
ModuleBase::WARNING_QUIT("InfoNonlocal::Read_NonLocal", "meshr_ps must be odd!");
}
}
else
{
ModuleBase::WARNING_QUIT("InfoNonlocal::Read_NonLocal", "<PP_BETA> doesn't match!");
}
} // end my_rank==0
#ifdef __MPI
Parallel_Common::bcast_int(meshr_ps);
Parallel_Common::bcast_int(LfromBeta[p1]);
#endif
double* radial_ps = new double[meshr_ps];
double* rab_ps = new double[meshr_ps];
double* beta_r = new double[meshr_ps];
ModuleBase::GlobalFunc::ZEROS(radial_ps, meshr_ps);
ModuleBase::GlobalFunc::ZEROS(rab_ps, meshr_ps);
ModuleBase::GlobalFunc::ZEROS(beta_r, meshr_ps);
if (my_rank == 0)
{
for (int ir = 0; ir < meshr_ps; ir++)
{
ifs >> radial_ps[ir];
ifs >> beta_r[ir];
ifs >> rab_ps[ir];
}
}
#ifdef __MPI
Parallel_Common::bcast_double(radial_ps, meshr_ps);
Parallel_Common::bcast_double(beta_r, meshr_ps);
Parallel_Common::bcast_double(rab_ps, meshr_ps);
#endif
tmpBeta_lm[p1].set_NL_proj(label,
it, // type
LfromBeta[p1], // angular momentum L
meshr_ps, // number of radial mesh
rab_ps,
radial_ps, // radial mesh value(a.u.)
beta_r,
kmesh,
dk,
dr_uniform); // delta k mesh in reciprocal space
if (PARAM.inp.out_element_info)
{
tmpBeta_lm[p1].plot(my_rank);
}
delete[] radial_ps;
delete[] rab_ps;
delete[] beta_r;
if (my_rank == 0)
{
ModuleBase::GlobalFunc::SCAN_END(ifs, "</PP_BETA>");
}
} // end projectors.
this->Beta[it].set_type_info(it, label, ps_type, nlmax, n_projectors, tmpBeta_lm);
ifs.close();
delete[] LfromBeta;
delete[] tmpBeta_lm;
return;
}
void InfoNonlocal::setupNonlocal(const int& ntype, Atom* atoms, std::ofstream& log, LCAO_Orbitals& orb)
{
//>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
//~~~~~~~~~~~~~~~~~~~~~~ 2 ~~~~~~~~~~~~~~~~~~~~~~~~~
// Read in non-local projector for each atom type.
// In fact this should be improved,
// the non-local projector should be transferred
// from .UPF file directly.
// mohan note 2011-03-04
//>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
if (PARAM.inp.basis_type == "lcao" || PARAM.inp.basis_type == "lcao_in_pw")
{
delete[] this->Beta;
this->Beta = new Numerical_Nonlocal[ntype];
delete[] this->nproj;
this->nproj = new int[ntype];
ModuleBase::GlobalFunc::ZEROS(this->nproj, ntype);
this->nprojmax = 0;
// if true: read in the nonlocal file from file.
// if false: get nonlocal information from .upf or .vwr directly
bool readin_nonlocal = false;
for (int it = 0; it < ntype; it++)
{
Atom* atom = &atoms[it];
if (readin_nonlocal)
{
this->Read_NonLocal(it,
atom,
this->nproj[it],
GlobalV::MY_RANK,
orb.get_kmesh(),
orb.get_dk(),
orb.get_dr_uniform(),
orb.orbital_file[it]);
}
else
{
this->Set_NonLocal(it, atom, this->nproj[it], orb.get_kmesh(), orb.get_dk(), orb.get_dr_uniform(), log);
}
this->nprojmax = std::max(this->nprojmax, this->nproj[it]);
// caoyu add 2021-05-24 to reconstruct atom_arrange::set_sr_NL
this->rcutmax_Beta = std::max(this->rcutmax_Beta, this->Beta[it].get_rcut_max());
}
ModuleBase::GlobalFunc::OUT(log, "Max number of nonlocal projectors (all elements)", this->nprojmax);
}
return;
}
#endif