From 039ff4a04718d459acb06b29ca74c73c0ab3ba3f Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?=E2=8E=9B=E2=8E=9D=20L=E2=88=86RBI=20=E2=8E=A0=E2=8E=9E?= <48409226+L4RBI@users.noreply.github.com> Date: Thu, 1 Oct 2020 02:08:07 +0100 Subject: [PATCH] added a classification algorithms folder --- classification/fcm.py | 57 +++++++++++++++++++++++++++++++++++++++++ classification/tools.py | 20 +++++++++++++++ 2 files changed, 77 insertions(+) create mode 100644 classification/fcm.py create mode 100644 classification/tools.py diff --git a/classification/fcm.py b/classification/fcm.py new file mode 100644 index 0000000..79a3ee9 --- /dev/null +++ b/classification/fcm.py @@ -0,0 +1,57 @@ +from tools import * + +# https://en.wikipedia.org/wiki/Fuzzy_clustering + + +class FuzzyCMeans: + def __init__(self, n_clusters, initial_centers, data, max_iter=250, m=2, error=1e-5): + assert m > 1 + #assert initial_centers.shape[0] == n_clusters + self.U = None + self.centers = initial_centers + self.max_iter = max_iter + self.m = m + self.error = error + self.data = data + + def membership(self, data, centers): + U_temp = cdist(data, centers, 'euclidean') + U_temp = numpy.power(U_temp, 2/(self.m - 1)) + denominator_ = U_temp.reshape( + (data.shape[0], 1, -1)).repeat(U_temp.shape[-1], axis=1) + denominator_ = U_temp[:, :, numpy.newaxis] / denominator_ + return 1 / denominator_.sum(2) + + def Centers(self, data, U): + um = U ** self.m + return (data.T @ um / numpy.sum(um, axis=0)).T + + def newImage(self, U, centers, im): + best = numpy.argmax(self.U, axis=-1) + # print(best) + # numpy.round() + image = im.astype(int) + for i in range(256): + image = numpy.where(image == float(i), centers[best[i]][0], image) + return image + + def compute(self): + self.U = self.membership(self.data, self.centers) + + past_U = numpy.copy(self.U) + begin_time = datetime.datetime.now() + for i in range(self.max_iter): + + self.centers = self.Centers(self.data, self.U) + self.U = self.membership(self.data, self.centers) + + if norm(self.U - past_U) < self.error: + break + past_U = numpy.copy(self.U) + x = datetime.datetime.now() - begin_time + return self.centers, self.U, x + +# that's how you run it, data being your data, and the other parameters being the basic FCM parameters such as numbe rof cluseters, degree of fuzziness and so on +# f = FuzzyCMeans(n_clusters=C, initial_centers=Initial_centers, +# data=data m=2, max_iter=1000, error=1e-5) +# centers, U, time = f.compute() diff --git a/classification/tools.py b/classification/tools.py new file mode 100644 index 0000000..682268a --- /dev/null +++ b/classification/tools.py @@ -0,0 +1,20 @@ +from matplotlib.image import imread +import matplotlib.pyplot as plt +from math import sqrt +import math +import random +import numpy +import operator +from scipy.spatial.distance import cdist +from scipy.linalg import norm +import datetime + + +def Histogram(path): + image = imread(path) + if len(image.shape) != 2: + def gray(rgb): return numpy.dot(rgb[..., :3], [0.2989, 0.5870, 0.1140]) + gray = gray(image) + image = gray + hist, bins = numpy.histogram(image.ravel(), 256, [0, 256]) + return adapt(hist)